RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 RBBP4Q09028 425 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 MEX3BQ6ZN04 569 aaKnown RBP19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ZNF440Q8IYI8 595 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 CADM2Q8N3J6 435 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 PCYOX1LQ8NBM8 494 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ABHD3Q8WU67 409 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ZNF583Q96ND8 569 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 SERINC1Q9NRX5 453 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 PAQR5Q9NXK6 330 aaPredicted RBP19.47■□□□□ 0.71
SCN1B-206ENST00000638536 TMED7Q9Y3B3 224 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 TEX15Q9BXT5 2789 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ZC3H12DA2A288 527 aaKnown RBP19.47■□□□□ 0.71
SCN1B-206ENST00000638536 CCT8L1PA6NM43 557 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 GJE1A6NN92 205 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 M0QX08 132 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ASCL1P50553 236 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 DUSP7Q16829 419 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 PDSS1Q5T2R2 415 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 OR2A2Q6IF42 318 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 DHRS4L2Q6PKH6 230 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 GPATCH1Q9BRR8 931 aaKnown RBP19.47■□□□□ 0.71
SCN1B-206ENST00000638536 MCTS1Q9ULC4 181 aaKnown RBP19.47■□□□□ 0.71
SCN1B-206ENST00000638536 ANGPT4Q9Y264 503 aa19.47■□□□□ 0.71
SCN1B-206ENST00000638536 POLQO75417 2590 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 SYT5O00445 386 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 SYNGR4O95473 234 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 COX6B1P14854 86 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 UQCRC1P31930 480 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 PCGF2P35227 344 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 DIO1P49895 249 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 BNIP2Q12982 314 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 VMACQ2NL98 169 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 ZNF550Q7Z398 422 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 KRT73Q86Y46 540 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 ZNF295-AS1Q8N0V1 137 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 GPR32P1Q8NGA4 272 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 CPNE4Q96A23 557 aaPredicted RBP19.46■□□□□ 0.71
SCN1B-206ENST00000638536 ECSITQ9BQ95 431 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 CACYBPQ9HB71 228 aaKnown RBP19.46■□□□□ 0.71
SCN1B-206ENST00000638536 GID8Q9NWU2 228 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 CMTM6Q9NX76 183 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 ABCA4P78363 2273 aa19.46■□□□□ 0.71
SCN1B-206ENST00000638536 HNRNPRO43390 633 aaKnown RBP19.45■□□□□ 0.7
SCN1B-206ENST00000638536 TPST2O60704 377 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 CGAP01215 116 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 TFPIP10646 304 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 HTR2AP28223 471 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 POLR2HP52434 150 aaKnown RBP19.45■□□□□ 0.7
SCN1B-206ENST00000638536 RAC3P60763 192 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 FBXL19-AS1Q494R0 122 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 TMPPEQ6ZT21 453 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 ARMC8Q8IUR7 673 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 DMRTC2Q8IXT2 367 aaPredicted RBP19.45■□□□□ 0.7
SCN1B-206ENST00000638536 RNF128Q8TEB7 428 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 TAMM41Q96BW9 452 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF607Q96SK3 696 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 SPOCK3Q9BQ16 436 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 SPATA5L1Q9BVQ7 753 aa19.45■□□□□ 0.7
SCN1B-206ENST00000638536 OPN3Q9H1Y3 402 aaPredicted RBP19.45■□□□□ 0.7
SCN1B-206ENST00000638536 SMNDC1O75940 238 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCN1B-206ENST00000638536 CRHP06850 196 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 FCGR2AP12318 317 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 HTR3AP46098 478 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 MYBPHQ13203 477 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 ZSWIM7Q19AV6 140 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 WBP2NLQ6ICG8 309 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 C8orf82Q6P1X6 216 aaPredicted RBP19.44■□□□□ 0.7
SCN1B-206ENST00000638536 FAM214BQ7L5A3 538 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 SLC15A3Q8IY34 581 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 RNASE6Q93091 150 aaKnown RBP19.44■□□□□ 0.7
SCN1B-206ENST00000638536 C3orf49Q96BT1 292 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 SH3GL1Q99961 368 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 ARMC7Q9H6L4 198 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 ING1Q9UK53 422 aaPredicted RBP19.44■□□□□ 0.7
SCN1B-206ENST00000638536 PACSIN3Q9UKS6 424 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 HRNRQ86YZ3 2850 aaPredicted RBP19.44■□□□□ 0.7
SCN1B-206ENST00000638536 AKAP6Q13023 2319 aa19.44■□□□□ 0.7
SCN1B-206ENST00000638536 A8MXE2 369 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SMAD9O15198 467 aaKnown RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SERPINB7O75635 380 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 IMPDH2P12268 514 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF474Q6S9Z5 364 aaPredicted RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 FCRLAQ7L513 359 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 OR4D11Q8NGI4 311 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SLC25A43Q8WUT9 341 aaPredicted RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 CCT8L2Q96SF2 557 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 TIGARQ9NQ88 270 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SPG11Q96JI7 2443 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF814B7Z6K7 855 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SULT2B1O00204 365 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 SS18L1O75177 396 aaPredicted RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 UQCRBP14927 111 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 CD247P20963 164 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 CPA2P48052 419 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 COPZ1P61923 177 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 MCEMP1Q8IX19 187 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 REXO5Q96IC2 774 aaKnown RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 GMPPAQ96IJ6 420 aaPredicted RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 RBM24Q9BX46 236 aaKnown RBP19.43■□□□□ 0.7
SCN1B-206ENST00000638536 GALNT8Q9NY28 637 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms