RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 STAC2Q6ZMT1 411 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 FUNDC1Q8IVP5 155 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 FOXC2Q99958 501 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 RABEP2Q9H5N1 569 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 PLEKHF2Q9H8W4 249 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 GPR52Q9Y2T5 361 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 TMED7Q9Y3B3 224 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
PNKP-228ENST00000637325 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
PNKP-228ENST00000637325 IL32P24001 234 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 TACR3P29371 465 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 SLC1A3P43003 542 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ATP4BP51164 291 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 COPZ1P61923 177 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 EPS8Q12929 822 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 FADDQ13158 208 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 RGNQ15493 299 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 MAPK11Q15759 364 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ZNF836Q6ZNA1 936 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
PNKP-228ENST00000637325 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
PNKP-228ENST00000637325 STEAP2Q8NFT2 490 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
PNKP-228ENST00000637325 DDIT4LQ96D03 193 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 PSD2Q9BQI7 771 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 HDHD5Q9BXW7 423 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ACTR6Q9GZN1 396 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 BCO1Q9HAY6 547 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 RLIMQ9NVW2 624 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 TMEM45AQ9NWC5 275 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 TRIM33Q9UPN9 1127 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 ZNF443Q9Y2A4 671 aaPredicted RBP12.28□□□□□ -0.44
PNKP-228ENST00000637325 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
PNKP-228ENST00000637325 TMEM72A0PK05 275 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 CDHR4A6H8M9 788 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ZNF724A8MTY0 619 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 DEFB108AA8MXU0 73 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 FAAHO00519 579 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ADAM11O75078 769 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ATE1O95260 518 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 PMS2P2O95744 297 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 THBS1P07996 1170 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 NUDT7P0C024 238 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 GKN3PP0CG01 181 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 PPIBP23284 216 aaKnown RBP12.27□□□□□ -0.45
PNKP-228ENST00000637325 CXCR1P25024 350 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 PLAURQ03405 335 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ZNF311Q5JNZ3 666 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 WFDC8Q8IUA0 241 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ZNF100Q8IYN0 542 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 CADM2Q8N3J6 435 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 MAL2Q969L2 176 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 ZNF300Q96RE9 604 aaPredicted RBP12.27□□□□□ -0.45
PNKP-228ENST00000637325 OR11A1Q9GZK7 315 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 OR10A4Q9H209 315 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 NPHS2Q9NP85 383 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 A4GALTQ9NPC4 353 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 TMEM181Q9P2C4 612 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.27□□□□□ -0.45
PNKP-228ENST00000637325 DCTN4Q9UJW0 460 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 OSGIN1Q9UJX0 560 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 DSPPQ9NZW4 1301 aa12.27□□□□□ -0.45
PNKP-228ENST00000637325 EVPLLA8MZ36 301 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SIAH2O43255 324 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 ZNF208O43345 1280 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 DNPH1O43598 174 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SASH3O75995 380 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 ADAP00813 363 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 KLK2P20151 261 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PSMB1P20618 241 aaKnown RBP12.26□□□□□ -0.45
PNKP-228ENST00000637325 MAP2K6P52564 334 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SLC35A1P78382 337 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 BEX5Q5H9J7 111 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PAGE3Q5JUK9 113 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 LRIF1Q5T3J3 769 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 GCNT6Q5T4J0 391 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 RNF220Q5VTB9 566 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PRAMEF8Q5VWM4 474 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PRAMEF7Q5VXH5 474 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 WBP2NLQ6ICG8 309 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 C22orf34Q6ZV56 151 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 CLIP4Q8N3C7 705 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PIGXQ8TBF5 258 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 KISS1RQ969F8 398 aaPredicted RBP12.26□□□□□ -0.45
PNKP-228ENST00000637325 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 ARL5BQ96KC2 179 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms