RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SLC25A45Q8N413 288 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 BRIX1Q8TDN6 353 aaKnown RBP6.59□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM255BQ8WV15 326 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 SLC41A2Q96JW4 573 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 ART5Q96L15 291 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 SLC46A1Q96NT5 459 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 MGLLQ99685 303 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 EGLN3Q9H6Z9 239 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 HMG20AQ9NP66 347 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 FGF20Q9NP95 211 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-230ENST00000634433 FBXO34Q9NWN3 711 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 CNIH4Q9P003 139 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 KLHL9Q9P2J3 617 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 ASH2LQ9UBL3 628 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 RPS6KB2Q9UBS0 482 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 DIMT1Q9UNQ2 313 aaKnown RBP6.59□□□□□ -1.35
BRCA1-230ENST00000634433 ERVK-19Q9WJR5 959 aa6.59□□□□□ -1.35
BRCA1-230ENST00000634433 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-230ENST00000634433 PRUNE2Q8WUY3 3088 aa6.59□□□□□ -1.36
BRCA1-230ENST00000634433 SPAG17Q6Q759 2223 aa6.59□□□□□ -1.36
BRCA1-230ENST00000634433 HTR3EA5X5Y0 456 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZSCAN5BA6NJL1 495 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 C17orf105B2RV13 164 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 KDM4EB2RXH2 506 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 MYL12BO14950 172 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 YKT6O15498 198 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CHP2O43745 196 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CDC123O75794 336 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NADKO95544 446 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 THY1P04216 161 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 GKN3PP0CG01 181 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 HSMCR30P0CW71 290 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 MYL12AP19105 171 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 MAOAP21397 527 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NR4A1P22736 598 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 RORAP35398 523 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 RFX3P48380 749 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ENTPD1P49961 510 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PGGHGQ32M88 737 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 C3orf38Q5JPI3 329 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 H1FNTQ75WM6 255 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 WDR5BQ86VZ2 330 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF227Q86WZ6 799 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 GATAD2AQ86YP4 633 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 AMER2Q8N7J2 671 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF614Q8N883 585 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF615Q8N8J6 731 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 Q8N9G6 341 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 RCBTB1Q8NDN9 531 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 DYNC2LI1Q8TCX1 351 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 FAM216AQ8WUB2 273 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CCNL2Q96S94 520 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PRSS27Q9BQR3 290 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 DSN1Q9H410 356 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 KCNE5Q9UJ90 142 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 SLC35A3Q9Y2D2 325 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NTNG1Q9Y2I2 539 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 EXOSC1Q9Y3B2 195 aaKnown RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 POMT1Q9Y6A1 747 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ABCA7Q8IZY2 2146 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZDBF2Q9HCK1 2354 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CENPVL1A0A0U1RR11 272 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 A0A1W2PQ09 198 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NPIPA7E9PJI5 369 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 DSCR3O14972 297 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 POLR1CO15160 346 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 OPN1MWP04001 364 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 SCG5P05408 212 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 S100A6P06703 90 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NPIPA8P0DM63 369 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 OPN1MW2P0DN77 364 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 OPN1MW3P0DN78 364 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 IFI30P13284 250 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PRG2P13727 222 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 FBLP22087 321 aaKnown RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 HTR2AP28223 471 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 GRK5P34947 590 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PPICP45877 212 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 GPR4P46093 362 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 MTNR1AP48039 350 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CTBP2P56545 445 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 LSM3P62310 102 aaKnown RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 FGFBP1Q14512 234 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NR0B2Q15466 257 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 SPHARQ15513 63 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 RNFT1Q5M7Z0 435 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 ZC3H14Q6PJT7 736 aaKnown RBP6.58□□□□□ -1.36
BRCA1-230ENST00000634433 TMPRSS11FQ6ZWK6 438 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PXKQ7Z7A4 578 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 GID4Q8IVV7 300 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 PHC2Q8IXK0 858 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 NANOGP1Q8N7R0 232 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 POGLUT1Q8NBL1 392 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 C16orf52Q8NHV5 167 aa6.58□□□□□ -1.36
BRCA1-230ENST00000634433 CNOT9Q92600 299 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms