RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ETV3LQ6ZN32 361 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 DPPA4Q7L190 304 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 RASGEF1AQ8N9B8 481 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 FAM98AQ8NCA5 519 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR13C4Q8NGS5 318 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR10J5Q8NHC4 309 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IFI44Q8TCB0 444 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 TMEM40Q8WWA1 233 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 EDEM1Q92611 657 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 VOPP1Q96AW1 172 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 BSCL2Q96G97 398 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 SLC39A8Q9C0K1 460 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 UXTQ9UBK9 157 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 GAB2Q9UQC2 676 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CAMK2AQ9UQM7 478 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ARL5AQ9Y689 179 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ENPP4Q9Y6X5 453 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ARRDC5A6NEK1 342 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR2AT4A6NND4 320 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 LDB2O43679 373 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 HBP1O60381 514 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 EIF4E2O60573 245 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 FMO6PO60774 539 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 VAMP5O95183 116 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 NFATC1O95644 943 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 FGF19O95750 216 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IFNA2P01563 188 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 RLN1P04808 185 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ZNF25P17030 456 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 AKR1C3P42330 323 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 GLP1RP43220 463 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 GPR3P46089 330 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 MNX1P50219 401 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 F2RL1P55085 397 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR10A3P58181 314 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 SRSF3P84103 164 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 SP3Q02447 781 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 GAMTQ14353 236 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CPSF6Q16630 551 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS11-209ENST00000622309 TIGD5Q53EQ6 642 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 SIRPB2Q5JXA9 342 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ELFN2Q5R3F8 820 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 DCST1Q5T197 706 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR10K2Q6IF99 312 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PRSS55Q6UWB4 352 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 SYT12Q8IV01 421 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IZUMO1Q8IYV9 350 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 DNAAF1Q8NEP3 725 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 BBS10Q8TAM1 723 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 SGCZQ96LD1 299 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CDC6Q99741 560 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ALG8Q9BVK2 526 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 FGF20Q9NP95 211 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 SIRT7Q9NRC8 400 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PARPBPQ9NWS1 579 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 NDOR1Q9UHB4 597 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 DNAJC25-GNG10A0A024R161 153 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 A6NLC8 198 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 F5H0A9 414 aaPredicted RBP7.35□□□□□ -1.23
VPS11-209ENST00000622309 KLF4O43474 513 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 PCDH8O95206 1070 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 DIRAS3O95661 229 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 PMP2P02689 132 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 SERPIND1P05546 499 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 TIMP2P16035 220 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 SDC1P18827 310 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 RAB5AP20339 215 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 PRPS1L1P21108 318 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 MAGEB1P43366 347 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 TNFRSF9Q07011 255 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 RGNQ15493 299 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 ZNF791Q3KP31 576 aaPredicted RBP7.35□□□□□ -1.23
VPS11-209ENST00000622309 PLEKHN1Q494U1 663 aaPredicted RBP7.35□□□□□ -1.23
VPS11-209ENST00000622309 ARHGAP40Q5TG30 622 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 OR2AK2Q8NG84 335 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 OR10D4PQ8NGN7 298 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 CD99L2Q8TCZ2 262 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 GPBAR1Q8TDU6 330 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 SMIM4Q8WVI0 70 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 GAL3ST3Q96A11 431 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 MED8Q96G25 268 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 ATG101Q9BSB4 218 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 MEPEQ9NQ76 525 aaPredicted RBP7.35□□□□□ -1.23
VPS11-209ENST00000622309 MMACHCQ9Y4U1 282 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 DSPPQ9NZW4 1301 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 TRBV4-1A0A0J9YWV2 114 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 A0A1W2PPC1 479 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 LOC730098B7Z3J9 87 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 GFYI3L273 518 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 DVL2O14641 736 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 PIRTP0C851 137 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 PKMP14618 531 aaKnown RBP7.35□□□□□ -1.23
VPS11-209ENST00000622309 AVPR2P30518 371 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 GDF5P43026 501 aa7.35□□□□□ -1.23
VPS11-209ENST00000622309 MRPS10P82664 201 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms