RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZAR1Q86SH2 424 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SDR9C7Q8NEX9 313 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 ZNF671Q8TAW3 534 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 GCDHQ92947 438 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 NXPE2Q96DL1 559 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 CLIP3Q96DZ5 547 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SPRTNQ9H040 489 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 RSPH9Q9H1X1 276 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 MCCC2Q9HCC0 563 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 KCNN3Q9UGI6 736 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SPATA2Q9UM82 520 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SATB2Q9UPW6 733 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 GXYLT2A0PJZ3 443 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 I3L521 148 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 ARL6IP5O75915 188 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 UCHL1P09936 223 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 UGT2B7P16662 529 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 TLX1P31314 330 aaPredicted RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 NAA10P41227 235 aaPredicted RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 EXOSC7Q15024 291 aaKnown RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 ZSWIM7Q19AV6 140 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 EXOSC6Q5RKV6 272 aaKnown RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 IDO2Q6ZQW0 420 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 OR52E2Q8NGJ4 325 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 LRRC20Q8TCA0 184 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 CNOT9Q92600 299 aaKnown RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 CCDC120Q96HB5 630 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 DERL3Q96Q80 235 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 FGF22Q9HCT0 170 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 OR6C2Q9NZP2 312 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 FLRT3Q9NZU0 649 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 TBC1D29Q9UFV1 150 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 SCP2D1Q9UJQ7 156 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 FLVCR2Q9UPI3 526 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 B3GALT2O43825 422 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 KAT7O95251 611 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 NGFRP08138 427 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 CAPZA2P47755 286 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 SELENOPP49908 381 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 CRYZQ08257 329 aaKnown RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 POU4F2Q12837 409 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 DYRK1AQ13627 763 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 FHL1Q13642 323 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 ZNF527Q8NB42 609 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 CEP76Q8TAP6 659 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 PTCHD1Q96NR3 888 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 CLEC4MQ9H2X3 399 aaPredicted RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 IL21RQ9HBE5 538 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 TMEM27Q9HBJ8 222 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 DUSP22Q9NRW4 184 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 KLF15Q9UIH9 416 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 PCDHGA9Q9Y5G4 932 aaKnown RBP18.8■□□□□ 0.6
NEK3-208ENST00000618534 SLC22A7Q9Y694 548 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 COLEC10Q9Y6Z7 277 aa18.8■□□□□ 0.6
NEK3-208ENST00000618534 B8ZZF3 427 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 G3V3Q6 166 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 GMDSO60547 372 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 CTSVO60911 334 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 TOXO94900 526 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 MAT2AP31153 395 aaKnown RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 GBX2P52951 348 aaPredicted RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 SFRP4Q6FHJ7 346 aaPredicted RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 ARHGAP11AQ6P4F7 1023 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ZNF613Q6PF04 617 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 BAIAP2L2Q6UXY1 529 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 UBE2Q1Q7Z7E8 422 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 COMMD7Q86VX2 200 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 CMTM4Q8IZR5 234 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ZNF614Q8N883 585 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 CDRT4Q8N9R6 151 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 OR2T35Q8NGX2 323 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 OR4K13Q8NH42 304 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 SMARCD2Q92925 531 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ORAI1Q96D31 301 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ERMAPQ96PL5 475 aaPredicted RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 PDCD1LG2Q9BQ51 273 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 BAIAP2Q9UQB8 552 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 A0A0B4J2E0 115 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 A0A1B0GWA3 101 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 A0A1B0GX12 115 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 IFNGP01579 166 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 SMIM10L1P0DMW3 83 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ZNF250P15622 560 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 SLC6A6P31641 620 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 RTL4Q6ZR62 310 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 FAM98AQ8NCA5 519 aaKnown RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 TMEM52Q8NDY8 209 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 SMIM10Q96HG1 83 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 OR2A5Q96R48 311 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ZNF559Q9BR84 538 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 ZNF436Q9C0F3 470 aaPredicted RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 ACTR6Q9GZN1 396 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 METTL17Q9H7H0 456 aaPredicted RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 RCE1Q9Y256 329 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 MRPS2Q9Y399 296 aaKnown RBP18.79■□□□□ 0.6
NEK3-208ENST00000618534 SPEF1Q9Y4P9 236 aa18.79■□□□□ 0.6
NEK3-208ENST00000618534 A0A1W2PQU0 124 aa18.78■□□□□ 0.6
NEK3-208ENST00000618534 CTDSPLO15194 276 aa18.78■□□□□ 0.6
NEK3-208ENST00000618534 FGF17O60258 216 aa18.78■□□□□ 0.6
NEK3-208ENST00000618534 ADAM11O75078 769 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms