RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LGALS8O00214 317 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 SSNA1O43805 119 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 ADAP00813 363 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 IGHV4-34P06331 123 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 TALDO1P37837 337 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 CXCL12P48061 93 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 SF3A2Q15428 464 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 PROKR2Q8NFJ6 384 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 OR52R1Q8NGF1 315 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 SENP5Q96HI0 755 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 NRSN2Q9GZP1 204 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 SLC25A19Q9HC21 320 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 CDH10Q9Y6N8 788 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 A0A1W2PRG6 482 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 PSMD9O00233 223 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MBTPS2O43462 519 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 CHST10O43529 356 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 PROS1P07225 676 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 CELP19835 753 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 PHF19Q5T6S3 580 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MFSD12Q6NUT3 480 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 SLC41A3Q96GZ6 507 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ZNF681Q96N22 645 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 LMF1Q96S06 567 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 SOCS6O14544 535 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 CDC42EP2O14613 210 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MPC2O95563 127 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 GRM7Q14831 915 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ELOCQ15369 112 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 CPOQ8IVL8 374 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 DUSP18Q8NEJ0 188 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ST8SIA4Q92187 359 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 RNFT2Q96EX2 444 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 GPR137Q96N19 417 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ZFP64Q9NPA5 681 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ENAMQ9NRM1 1142 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 RPS6KB2Q9UBS0 482 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 GPR89AB7ZAQ6 455 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 TRIM3O75382 744 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 DHFRP00374 187 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 GPR89BP0CG08 455 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ACP2P11117 423 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 DNASE1P24855 282 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 HCCSP53701 268 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 GRK1Q15835 563 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 ZNF770Q6IQ21 691 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 LHFPL5Q8TAF8 219 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 NEIL3Q8TAT5 605 aa13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 RBPMSQ93062 196 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 MRPS33Q9Y291 106 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-208ENST00000617339 IFNA7P01567 189 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 ANXA3P12429 323 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 ELK1P19419 428 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SLC27A4Q6P1M0 643 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 PIGXQ8TBF5 258 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 UFD1Q92890 307 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 PIGUQ9H490 435 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 CHST2Q9Y4C5 530 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 A0A0G2JPF8 293 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 C17orf51A8MQB3 221 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 HNRNPCL3B7ZW38 293 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 RAB36O95755 333 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 HNRNPCL4P0DMR1 293 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 CLUP10909 449 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 GCGRP47871 477 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 EVX1P49640 407 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 ST3GAL3Q11203 375 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 FZD2Q14332 565 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 NTRK2Q16620 822 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SYT14P1Q58G82 188 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SDF2Q99470 211 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 IFT27Q9BW83 186 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 KCNN2Q9H2S1 579 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 FBXL4Q9UKA2 621 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 ADAM29Q9UKF5 820 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SIGLEC5O15389 551 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 TPOP07202 933 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 DRD5P21918 477 aa13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
SHROOM1-208ENST00000617339 SIGLEC14Q08ET2 396 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms