RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SOX8P57073 446 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 EGR3Q06889 387 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 PDE7AQ13946 482 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS11-206ENST00000614944 FAM69AQ5T7M9 428 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 TMEM198Q66K66 360 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SKA3Q8IX90 412 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 POP5Q969H6 163 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 MRGPRX4Q96LA9 322 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 CCDC74BQ96LY2 380 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 CPPED1Q9BRF8 314 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 DUSP23Q9BVJ7 150 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 SRMSQ9H3Y6 488 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 CAPN10Q9HC96 672 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SLC6A20Q9NP91 592 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 PARD6AQ9NPB6 346 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 AKAP7Q9P0M2 348 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 TAC3Q9UHF0 121 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 LEF1Q9UJU2 399 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 PILRAQ9UKJ1 303 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 PLSCR5A0PG75 271 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 DUXAA6NLW8 204 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 DSCR3O14972 297 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 ARPC5O15511 151 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 HTR5AP47898 357 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 MRPS11P82912 194 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 GAGE1Q13065 139 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 P2RY14Q15391 338 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 DUOXA1Q1HG43 343 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 RFTN2Q52LD8 501 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 SLC23A3Q6PIS1 610 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 VHLLQ6RSH7 139 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 TAF8Q7Z7C8 310 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 CCL4L1Q8NHW4 92 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SLC37A2Q8TED4 501 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 MRPS24Q96EL2 167 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 IL17FQ96PD4 163 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 RNF32Q9H0A6 362 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 MUC13Q9H3R2 512 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 TCF7L1Q9HCS4 588 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 POMT2Q9UKY4 750 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 LAMA3Q16787 3333 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 A0A0J9YY10 115 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 OR52A4PA6NMU1 304 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 PROM1O43490 865 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 NUDT21O43809 227 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 BCKDHAP12694 445 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 HOXB9P17482 250 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 C4BPBP20851 252 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 TIA1P31483 386 aaKnown RBP eCLIP8.16□□□□□ -1.11e-6■□□□□ 9.1
VPS11-206ENST00000614944 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 POLR2JP52435 117 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 ZNF155Q12901 538 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 GPR18Q14330 331 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SHBQ15464 509 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 C14orf28Q4W4Y0 310 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 KHDRBS2Q5VWX1 349 aaKnown RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 TTC23Q5W5X9 447 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 NOXRED1Q6NXP6 359 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 OOSP2Q86WS3 158 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SLC35F3Q8IY50 421 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 OR10A7Q8NGE5 316 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 BBS10Q8TAM1 723 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 THRSPQ92748 146 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 COQ8BQ96D53 544 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 TCEAL2Q9H3H9 227 aaPredicted RBP8.16□□□□□ -1.1
VPS11-206ENST00000614944 ZFP64Q9NPA5 681 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 PTGDR2Q9Y5Y4 395 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 SLCO1B1Q9Y6L6 691 aa8.16□□□□□ -1.1
VPS11-206ENST00000614944 DHRS12A0PJE2 317 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 D6RAR5 112 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 PKIAP61925 76 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 PRRT3Q5FWE3 981 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 LRIF1Q5T3J3 769 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 JMJD6Q6NYC1 403 aaPredicted RBP8.15□□□□□ -1.1
VPS11-206ENST00000614944 SPESP1Q6UW49 350 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 OR52N2Q8NGI0 321 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 NEK7Q8TDX7 302 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.1
VPS11-206ENST00000614944 POTEKPQ9BYX7 375 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
VPS11-206ENST00000614944 MOKQ9UQ07 419 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 FIS1Q9Y3D6 152 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 THADAQ6YHU6 1953 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 MAGEB17A8MXT2 336 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 SLC1A7O00341 560 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 YY2O15391 372 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 ORC5O43913 435 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 SEC22BO75396 215 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 TBX6O95947 436 aaPredicted RBP8.15□□□□□ -1.1
VPS11-206ENST00000614944 PDGFBP01127 241 aaPredicted RBP8.15□□□□□ -1.1
VPS11-206ENST00000614944 NMBP08949 121 aa8.15□□□□□ -1.1
VPS11-206ENST00000614944 SMIM10L1P0DMW3 83 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms