RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 A0A1B0GV72 72 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 NPIPA2E9PIF3 369 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 IL5P05113 134 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 AKR1A1P14550 325 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SOX2P48431 317 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 ARHGAP11BQ3KRB8 267 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 MS4A13Q5J8X5 152 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 TEX30Q5JUR7 227 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR2L13Q8N349 312 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PSMG2Q969U7 264 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 NUDT9Q9BW91 350 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 ELP3Q9H9T3 547 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 A6NDN8 102 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 MRPL3P09001 348 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 C21orf33P30042 268 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 ZNF91Q05481 1191 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 NUS1Q96E22 293 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 DDOQ99489 341 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 INPP5KQ9BT40 448 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 TEX101Q9BY14 249 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SRMSQ9H3Y6 488 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 MTHFD2LQ9H903 347 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 KCTD3Q9Y597 815 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 MAFBQ9Y5Q3 323 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 RREB1Q92766 1687 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 LINC00862A6NCI5 91 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 BLOC1S5-TXNDC5H3BN57 136 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PRDX3P30048 256 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 EPHA5P54756 1037 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PLBD1Q6P4A8 553 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CBLL1Q75N03 491 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR4K14Q8NGD5 310 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PRR11Q96HE9 360 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 HHLA2Q9UM44 414 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 VSTM5A8MXK1 200 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 IDUAP35475 653 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PDLIM3Q53GG5 364 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 ADAM5Q6NVV9 412 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 WDR73Q6P4I2 378 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 UEVLDQ8IX04 471 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 ZNF596Q8TC21 504 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 INTS14Q96SY0 518 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CLMPQ9H6B4 373 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 IGSF5Q9NSI5 407 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 HMGCLP35914 325 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 BLKP51451 505 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 LSMEM2Q8N112 164 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 LGALS14Q8TCE9 139 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SYNPO2LQ9H987 977 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 NMUR1Q9HB89 426 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CXXC1Q9P0U4 656 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 ANKRD36A6QL64 1941 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CCL15-CCL14A0A0B4J2E2 113 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CORO1AP31146 461 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 CCL15Q16663 113 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SUMF1Q8NBK3 374 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ZFPM2Q8WW38 1151 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 WDFY2Q96P53 400 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GALNT9Q9HCQ5 603 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 C7orf72A4D263 438 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 LY86O95711 162 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OPRD1P41143 372 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 BEX3Q00994 111 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 RGNQ15493 299 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SLC39A9Q9NUM3 307 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 HEATR5BQ9P2D3 2071 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 C6P13671 934 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CBLP22681 906 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 RBP2P50120 134 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ACY1Q03154 408 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 NKPD1Q17RQ9 610 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ELFN2Q5R3F8 820 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CDHR3Q6ZTQ4 885 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 TTLL10Q6ZVT0 673 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ERN2Q76MJ5 926 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 GALNT10Q86SR1 603 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CPOQ8IVL8 374 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PTDSS2Q9BVG9 487 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SMDT1Q9H4I9 107 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 NCOR1O75376 2440 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OR5H14A6NHG9 310 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 M0R2N6 131 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CLN5O75503 358 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 HTR1FP30939 366 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PNRC1Q12796 327 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 SERTAD2Q14140 314 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GGTA1PQ4G0N0 100 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 TMEM220Q6QAJ8 160 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GDPD3Q7L5L3 318 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OVCH1Q7RTY7 1134 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OR13C8Q8NGS7 320 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GPR119Q8TDV5 335 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 DEFB129Q9H1M3 183 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ZNF331Q9NQX6 463 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms