RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 HBMQ6B0K9 141 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 ARFGAP2Q8N6H7 521 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 ZNF611Q8N823 705 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 STON2Q8WXE9 905 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 ZNF524Q96C55 264 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 ADGRG7Q96K78 797 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 MTHFD2LQ9H903 347 aaPredicted RBP17.14■□□□□ 0.33
SGMS1-208ENST00000608287 RNF122Q9H9V4 155 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 MCTS1Q9ULC4 181 aaKnown RBP17.14■□□□□ 0.33
SGMS1-208ENST00000608287 TRIM33Q9UPN9 1127 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 A0A096LPI6 279 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 CLDN24A6NM45 220 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 CLIC1O00299 241 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 ADAMDEC1O15204 470 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 EFNA2O43921 213 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 BCAS1O75363 584 aaPredicted RBP17.13■□□□□ 0.33
SGMS1-208ENST00000608287 SYNGR4O95473 234 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 SHC1P29353 583 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 CAPRIN1Q14444 709 aaKnown RBP17.13■□□□□ 0.33
SGMS1-208ENST00000608287 SLC25A53Q5H9E4 307 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 FAM71CQ8NEG0 241 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 WDR60Q8WVS4 1066 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 OSTF1Q92882 214 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 HS3ST6Q96QI5 342 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 SIKE1Q9BRV8 207 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 RABEP2Q9H5N1 569 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 FANCFQ9NPI8 374 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM45AQ9NWC5 275 aa17.13■□□□□ 0.33
SGMS1-208ENST00000608287 ROS1P08922 2347 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM247A6NEH6 219 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 GJE1A6NN92 205 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 AQP8O94778 261 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 NTN1O95631 604 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 BCHEP06276 602 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 IL7RP16871 459 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 RYKP34925 604 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 SLC6A8P48029 635 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 CRISP3P54108 245 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 CARD18P57730 90 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 SESN3P58005 492 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 SELENBP1Q13228 472 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 GNA13Q14344 377 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM176BQ3YBM2 270 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-208ENST00000608287 PAGE3Q5JUK9 113 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 VWA1Q6PCB0 445 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 ZNF704Q6ZNC4 412 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-208ENST00000608287 ZNF563Q8TA94 476 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 ST8SIA1Q92185 356 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 THUMPD1Q9NXG2 353 aaKnown RBP17.12■□□□□ 0.33
SGMS1-208ENST00000608287 CALML5Q9NZT1 146 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 LPAR3Q9UBY5 353 aa17.12■□□□□ 0.33
SGMS1-208ENST00000608287 HS3ST1O14792 307 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 DNAJA2O60884 412 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 PLGP00747 810 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 DBIP07108 87 aaKnown RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 TFPTP0C1Z6 253 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 THBS2P35442 1172 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 KIR2DL2P43627 348 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 MERTKQ12866 999 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 RGNQ15493 299 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 MAPK11Q15759 364 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 LRIF1Q5T3J3 769 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 SLC38A5Q8WUX1 472 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 CNOT9Q92600 299 aaKnown RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 PMM1Q92871 262 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 STARD4Q96DR4 205 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 ZC3HAV1LQ96H79 300 aaKnown RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 SLC52A3Q9NQ40 469 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 TIGARQ9NQ88 270 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 EXOSC3Q9NQT5 275 aaKnown RBP17.11■□□□□ 0.33
SGMS1-208ENST00000608287 SLC25A37Q9NYZ2 338 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 SLAMF8Q9P0V8 285 aa17.11■□□□□ 0.33
SGMS1-208ENST00000608287 CR1P17927 2039 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 ETV2O00321 342 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-208ENST00000608287 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.33
SGMS1-208ENST00000608287 HOXB9P17482 250 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-208ENST00000608287 RPS4Y1P22090 263 aaKnown RBP17.1■□□□□ 0.33
SGMS1-208ENST00000608287 SLC7A1P30825 629 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 FADDQ13158 208 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 C3orf33Q6P1S2 294 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 MAPK1IP1LQ8NDC0 245 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM19Q96HH6 336 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 REXO5Q96IC2 774 aaKnown RBP17.1■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 MED4Q9NPJ6 270 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 SERINC1Q9NRX5 453 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 FGFR1OP2Q9NVK5 253 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 CLEC4AQ9UMR7 237 aa17.1■□□□□ 0.33
SGMS1-208ENST00000608287 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 A0A1W2PP18 115 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 VIMP08670 466 aaKnown RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 NUDT7P0C024 238 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 CD8BP10966 210 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 LOXP28300 417 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms