RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SLC16A13Q7RTY0 426 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 WDR53Q7Z5U6 358 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PXKQ7Z7A4 578 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NAA40Q86UY6 237 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MARCH9Q86YJ5 346 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARRDC1Q8N5I2 433 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RTL3Q8N8U3 475 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 AQP11Q8NBQ7 271 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 REPS2Q8NFH8 660 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 BEST4Q8NFU0 473 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR4F15Q8NGB8 312 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR9Q2Q8NGE9 314 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR52N2Q8NGI0 321 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR10Q1Q8NGQ4 319 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR6B3Q8NGW1 331 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HUS1BQ8NHY5 278 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RNASE11Q8TAA1 199 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF461Q8TAF7 563 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NEIL3Q8TAT5 605 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SPPL2AQ8TCT8 520 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD99L2Q8TCZ2 262 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD200R1Q8TD46 325 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMIM4Q8WVI0 70 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 APOBEC4Q8WW27 367 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PIH1D2Q8WWB5 315 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PHYHIPQ92561 330 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB24Q969Q5 203 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC25A36Q96CQ1 311 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 C14orf144Q96I85 54 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LURAP1Q96LR2 239 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HS6ST2Q96MM7 605 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF582Q96NG8 517 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MS4A4EQ96PG1 132 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PANX1Q96RD7 426 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 GPR21Q99679 349 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TCF25Q9BQ70 676 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MESP1Q9BRJ9 268 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SORBS1Q9BX66 1292 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARL6Q9H0F7 186 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LMAN2LQ9H0V9 348 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LRRN3Q9H3W5 708 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NMNAT1Q9HAN9 279 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HRASLSQ9HDD0 168 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC2A4RGQ9NR83 387 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TLR8Q9NR97 1041 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CTPS2Q9NRF8 586 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 DUSP22Q9NRW4 184 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MED17Q9NVC6 651 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 FLRT1Q9NZU1 646 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF282Q9UDV7 671 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OPN4Q9UHM6 478 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 EIF2B4Q9UI10 523 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRTO4Q9UKD2 239 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 FZD4Q9ULV1 537 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SRPK3Q9UPE1 567 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TP53TG5Q9Y2B4 290 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC45A1Q9Y2W3 748 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM184BQ9Y519 407 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OARD1Q9Y530 152 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PCDHB1Q9Y5F3 818 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAI2Q9Y5P3 530 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 POMT1Q9Y6A1 747 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PATJQ8NI35 1801 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ADAMTSL1Q8N6G6 1762 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LCTP09848 1927 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MTCL1Q9Y4B5 1905 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF106Q9H2Y7 1883 aaKnown RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 KCNE1BA0A087WTH5 132 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 A0A0G2JK05 382 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 A0A0G2JNJ9 132 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 A0A1W2PRX2 142 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANKRD20A5PA0PJZ0 165 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM221BA6H8Z2 402 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 LOC730098B7Z3J9 87 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 WASH3PC4AMC7 463 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 MKRN2OSH3BPM6 223 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 GABARAPH6UMI1 98 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 J3QRE1 110 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 RNASET2O00584 256 aaKnown RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 CLDN4O14493 209 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 AQP7O14520 342 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 PGRMC2O15173 223 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 MID1O15344 667 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 PPIHO43447 177 aaKnown RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLPP2O43688 288 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 PCDH7O60245 1069 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 HBP1O60381 514 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 CREBL2O60519 120 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 TSPAN3O60637 253 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 UGDHO60701 494 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 CRTAPO75718 401 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 OAZ2O95190 189 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 CLDN9O95484 217 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 VNN2O95498 520 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 LATS1O95835 1130 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 EIF4EP06730 217 aaKnown RBP3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 IL3P08700 152 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD63P08962 238 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 SBK2P0C263 348 aa3.75□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANKRD34CP0C6C1 535 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 360.4 ms