RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 HSP90B2PQ58FF3 399 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 PRAMEF8Q5VWM4 474 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 PRAMEF7Q5VXH5 474 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF226Q9NYT6 803 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 VAPAQ9P0L0 249 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 LEF1Q9UJU2 399 aaPredicted RBP19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 HDGFL3Q9Y3E1 203 aa19.5■□□□□ 0.71
PPFIA3-208ENST00000602726 TMED7-TICAM2A0A0A6YYA0 188 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 SMAD9O15198 467 aaKnown RBP19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 FESP07332 822 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 GKN3PP0CG01 181 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 TACR3P29371 465 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 CCKARP32238 428 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 RASGEF1BQ0VAM2 473 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 POU4F3Q15319 338 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 GCNT6Q5T4J0 391 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 RNF220Q5VTB9 566 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 METTL21CQ5VZV1 264 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 NUFIP2Q7Z417 695 aaKnown RBP19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 CLIP4Q8N3C7 705 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 BBS10Q8TAM1 723 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 ZHX1-C8orf76Q96EF9 292 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 SPATA9Q9BWV2 254 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 OR11A1Q9GZK7 315 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF385DQ9H6B1 395 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 BCL2L10Q9HD36 194 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 OSGIN1Q9UJX0 560 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 EDARQ9UNE0 448 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 CORO2BQ9UQ03 480 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 TMED7Q9Y3B3 224 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 AKAP9Q99996 3911 aa19.49■□□□□ 0.71
PPFIA3-208ENST00000602726 TRBV5-3A0A0A0MS03 114 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 EVPLLA8MZ36 301 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 CYTIPO60759 359 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 PGM3O95394 542 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 HRGP04196 525 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 TROVE2P10155 538 aaKnown RBP eCLIP19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 COPZ1P61923 177 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF311Q5JNZ3 666 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 ANKRD34AQ69YU3 496 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF550Q7Z398 422 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 DDIT4LQ96D03 193 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 DNAJA3Q96EY1 480 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 ARL5BQ96KC2 179 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 PSD2Q9BQI7 771 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 TMEM120AQ9BXJ8 343 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 PRDM4Q9UKN5 801 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 NDUFAF1Q9Y375 327 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 GMEB1Q9Y692 573 aa19.48■□□□□ 0.71
PPFIA3-208ENST00000602726 ANGPT2O15123 496 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF208O43345 1280 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 PMS2P2O95744 297 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 KLK2P20151 261 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 DLEU7Q6UYE1 221 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 STAC2Q6ZMT1 411 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 MTDHQ86UE4 582 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 CADM2Q8N3J6 435 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 NFKBIDQ8NI38 313 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 ZC3HAV1LQ96H79 300 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 LIME1Q9H400 295 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 BCO1Q9HAY6 547 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 FGFR1OP2Q9NVK5 253 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 ST6GALNAC2Q9UJ37 374 aa19.47■□□□□ 0.71
PPFIA3-208ENST00000602726 TMEM72A0PK05 275 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 DNPH1O43598 174 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 VIMP08670 466 aaKnown RBP19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 ARAFP10398 606 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 PPP3CBP16298 524 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 ACAA2P42765 397 aaKnown RBP19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 MAP2K6P52564 334 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 OR2B6P58173 313 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 CDK6Q00534 326 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 WBP2NLQ6ICG8 309 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 REEP3Q6NUK4 255 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 TFAP2EQ6VUC0 442 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 C10orf111Q8N326 155 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 TSPEARQ8WU66 669 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 ZNF775Q96BV0 537 aaPredicted RBP19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 ADAM19Q9H013 955 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 IKZF5Q9H5V7 419 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 C6orf203Q9P0P8 240 aaPredicted RBP19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 TMEM181Q9P2C4 612 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 ING1Q9UK53 422 aaPredicted RBP19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 TRAPPC4Q9Y296 219 aa19.46■□□□□ 0.71
PPFIA3-208ENST00000602726 FREM1Q5H8C1 2179 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 ZNF724A8MTY0 619 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 ETS2P15036 469 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 GPX2P18283 190 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 CRYGSP22914 178 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 CXCR1P25024 350 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 RUNDC3AQ59EK9 446 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 DHDDSQ86SQ9 333 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 KRT73Q86Y46 540 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 DPP10Q8N608 796 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 NINJ1Q92982 152 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 ZNF300Q96RE9 604 aaPredicted RBP19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 CPPED1Q9BRF8 314 aaPredicted RBP19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 MED4Q9NPJ6 270 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 EMC3Q9P0I2 261 aa19.45■□□□□ 0.7
PPFIA3-208ENST00000602726 GPR52Q9Y2T5 361 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms