RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	LSR	Q86X29	649 aa	Predicted RBP	13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	C10orf111	Q8N326	155 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	MAL2	Q969L2	176 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	ARL5B	Q96KC2	179 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	SIKE1	Q9BRV8	207 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	MED18	Q9BUE0	208 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	KLHL4	Q9C0H6	718 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	OR11A1	Q9GZK7	315 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	RABEP2	Q9H5N1	569 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	BCO1	Q9HAY6	547 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	BCL2L10	Q9HD36	194 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	KLHL9	Q9P2J3	617 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	ST6GALNAC2	Q9UJ37	374 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	OSGIN1	Q9UJX0	560 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	CHST2	Q9Y4C5	530 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	CELSR1	Q9NYQ6	3014 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	TEP1	Q99973	2627 aa	Known RBP	13.77	□□□□□ -0.2
PLD3-223	ENST00000600948	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	SIAH2	O43255	324 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	FES	P07332	822 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	GKN3P	P0CG01	181 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	ARAF	P10398	606 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	HIVEP1	P15822	2718 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	CRYGS	P22914	178 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	PPIB	P23284	216 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	FKBP2	P26885	142 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	TACR3	P29371	465 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	SLC1A3	P43003	542 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	PRRC2A	P48634	2157 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	CLK1	P49759	484 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	POLR2H	P52434	150 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	CSNK2A1	P68400	391 aa	Predicted RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	RASGEF1B	Q0VAM2	473 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	POU4F3	Q15319	338 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	ANKRD34A	Q69YU3	496 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	ABLIM2	Q6H8Q1	611 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	STK32C	Q86UX6	486 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	CLIP4	Q8N3C7	705 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	BBS10	Q8TAM1	723 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	NINJ1	Q92982	152 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	TACO1	Q9BSH4	297 aa	Known RBP	13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	SPATA9	Q9BWV2	254 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	ADAM19	Q9H013	955 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	IKZF5	Q9H5V7	419 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	PLEKHF2	Q9H8W4	249 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF226	Q9NYT6	803 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	TRIM33	Q9UPN9	1127 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	IFT52	Q9Y366	437 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	TMED7	Q9Y3B3	224 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	HDGFL3	Q9Y3E1	203 aa		13.77	□□□□□ -0.21
PLD3-223	ENST00000600948	MED13L	Q71F56	2210 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948		A0A0G2JND7	137 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	TMEM72	A0PK05	275 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	DEFB108A	A8MXU0	73 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	PGM3	O95394	542 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	PMS2P2	O95744	297 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	PRG2	P13727	222 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	UQCRB	P14927	111 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	CCNA2	P20248	432 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	PSMB1	P20618	241 aa	Known RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	IST1	P53990	364 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	LARS2	Q15031	903 aa	Known RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	ZSWIM7	Q19AV6	140 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	GCNT6	Q5T4J0	391 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	DLEU7	Q6UYE1	221 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	MTDH	Q86UE4	582 aa	Known RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	GABRG1	Q8N1C3	465 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	DNAJA3	Q96EY1	480 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF300	Q96RE9	604 aa	Predicted RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	LEF1	Q9UJU2	399 aa	Predicted RBP	13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	PRDM4	Q9UKN5	801 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF232	Q9UNY5	417 aa		13.76	□□□□□ -0.21
PLD3-223	ENST00000600948	ROS1	P08922	2347 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF724	A8MTY0	619 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	C5orf58	C9J3I9	102 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF208	O43345	1280 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	DNPH1	O43598	174 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	GCM2	O75603	506 aa	Predicted RBP	13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	THBD	P07204	575 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	GPX2	P18283	190 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	ZNF311	Q5JNZ3	666 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	METTL21C	Q5VZV1	264 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	PAMR1	Q6UXH9	720 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	RETREG3	Q86VR2	466 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	DPP10	Q8N608	796 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	NFKBID	Q8NI38	313 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	ZHX1-C8orf76	Q96EF9	292 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	TMEM120A	Q9BXJ8	343 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	OR10A4	Q9H209	315 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	CACYBP	Q9HB71	228 aa	Known RBP	13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	FANCF	Q9NPI8	374 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	TRAPPC4	Q9Y296	219 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	PLEKHA6	Q9Y2H5	1048 aa		13.75	□□□□□ -0.21
PLD3-223	ENST00000600948	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms