RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	GFRA1	P56159	465 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	TRAM2	Q15035	370 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	SLC25A53	Q5H9E4	307 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	ALG10B	Q5I7T1	473 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	SWT1	Q5T5J6	900 aa	Known RBP	19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	GDF7	Q7Z4P5	450 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	PIK3C3	Q8NEB9	887 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	LRTOMT	Q8WZ04	291 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	C3orf49	Q96BT1	292 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	NPAS1	Q99742	590 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	ADAM19	Q9H013	955 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	DCLRE1B	Q9H816	532 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	REEP1	Q9H902	201 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	C12orf10	Q9HB07	376 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	RHCG	Q9UBD6	479 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	SLC7A7	Q9UM01	511 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR14I1	A6ND48	311 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	NPIPA2	E9PIF3	369 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	NPIPA3	F8WFD2	350 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026		H0Y3Z8	333 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	FFAR1	O14842	300 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	CHP2	O43745	196 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	SEMA7A	O75326	666 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	GADD45G	O95257	159 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	BAG2	O95816	211 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	PNMT	P11086	282 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	ABO	P16442	354 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	BMP7	P18075	431 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	ADH6	P28332	368 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	TACR3	P29371	465 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	GCK	P35557	465 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	POLR2H	P52434	150 aa	Known RBP	19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	CDH12	P55289	794 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	CRYZ	Q08257	329 aa	Known RBP	19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	MERTK	Q12866	999 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	FOXF1	Q12946	379 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	RCN1	Q15293	331 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	ATP6AP1	Q15904	470 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	TMEM44	Q2T9K0	475 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	NHSL2	Q5HYW2	709 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	DCST1	Q5T197	706 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	POC1B	Q8TC44	478 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	SARAF	Q96BY9	339 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	ZNF524	Q96C55	264 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	MPP4	Q96JB8	637 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	PIGQ	Q9BRB3	760 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	BDH2	Q9BUT1	245 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	ANKRD19P	Q9H560	264 aa		19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	NMNAT1	Q9HAN9	279 aa	Predicted RBP	19.82	■□□□□ 0.76
LTBP4-227	ENST00000600026	PRRC2C	Q9Y520	2896 aa	Known RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	MED12	Q93074	2177 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	OR2M5	A3KFT3	312 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	C7orf72	A4D263	438 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ELOA3D	A6NLF2	546 aa	Predicted RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ETV2	O00321	342 aa	Predicted RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	PRSS23	O95084	383 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ZNF17	P17021	662 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	CXCR1	P25024	350 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	APOBEC1	P41238	236 aa	Known RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	DLX5	P56178	289 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	GK3P	Q14409	553 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ELOA3B	Q3SY89	546 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	TSPYL5	Q86VY4	417 aa	Predicted RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ELOA3	Q8NG57	546 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	FAM57A	Q8TBR7	257 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	SLC38A4	Q969I6	547 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ABTB1	Q969K4	478 aa	Predicted RBP	19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	DHRS1	Q96LJ7	313 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	ZNF835	Q9Y2P0	537 aa		19.81	■□□□□ 0.76
LTBP4-227	ENST00000600026	HECTD1	Q9ULT8	2610 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	TMED7-TICAM2	A0A0A6YYA0	188 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	TNFRSF11B	O00300	401 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	MGRN1	O60291	552 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	SLC19A2	O60779	497 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	ACTL6A	O96019	429 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	TPO	P07202	933 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	CHM	P24386	653 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	FOXD4	Q12950	439 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	FGD3	Q5JSP0	725 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	VASN	Q6EMK4	673 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026		Q6ZPB1	254 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	AMIGO2	Q86SJ2	522 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	ATG4D	Q86TL0	474 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	CD163	Q86VB7	1156 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	PQLC1	Q8N2U9	271 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	CENPN	Q96H22	339 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	HS6ST2	Q96MM7	605 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	SERINC1	Q9NRX5	453 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	OSGIN1	Q9UJX0	560 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	TMCC3	Q9ULS5	477 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	TMED7	Q9Y3B3	224 aa		19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	SAMHD1	Q9Y3Z3	626 aa	Known RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026	SPIN1	Q9Y657	262 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-227	ENST00000600026		A0A1W2PRQ8	180 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	BCKDK	O14874	412 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	E2F6	O75461	281 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	WISP1	O95388	367 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	THY1	P04216	161 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	ANPEP	P15144	967 aa		19.79	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms