RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 TPST2O60704 377 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 E2F6O75461 281 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 CYP7B1O75881 506 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 CSTAP01040 98 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 UBTFL6P0CB48 400 aaPredicted RBP11.48□□□□□ -0.57
UPF1-208ENST00000600012 RHCEP18577 417 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 EVI2BP34910 448 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 VHLP40337 213 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 ZNF136P52737 540 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 CDH12P55289 794 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 LAPTM4AQ15012 233 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 OPN5Q6U736 354 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 B3GNT6Q6ZMB0 384 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 TRILQ7L0X0 811 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 MARCH3Q86UD3 253 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 CYP4Z1Q86W10 505 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 HS3ST5Q8IZT8 346 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 SLC15A4Q8N697 577 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 TMEM251Q8N6I4 163 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 OR10G3Q8NGC4 313 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 OR5M9Q8NGP3 310 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 PHOSPHO1Q8TCT1 267 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 EME1Q96AY2 570 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 SPACA9Q96E40 222 aaPredicted RBP11.48□□□□□ -0.57
UPF1-208ENST00000600012 PRRC1Q96M27 445 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 ZNF347Q96SE7 839 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 MCHR1Q99705 422 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 TTYH2Q9BSA4 534 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 REEP1Q9H902 201 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 SACM1LQ9NTJ5 587 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 A4GNTQ9UNA3 340 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
UPF1-208ENST00000600012 MAGED1Q9Y5V3 778 aaPredicted RBP11.48□□□□□ -0.57
UPF1-208ENST00000600012 LIPGQ9Y5X9 500 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
UPF1-208ENST00000600012 ANKHD1Q8IWZ3 2542 aaKnown RBP11.48□□□□□ -0.57
UPF1-208ENST00000600012 ALG1L2C9J202 215 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 G3V3Y1 287 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 SOCS2O14508 198 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 AQP7O14520 342 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 SUSD5O60279 629 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 FADS1O60427 444 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 ADAM11O75078 769 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 WDR1O75083 606 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 NGFRP08138 427 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 UBL4AP11441 157 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 NAGAP17050 411 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 HTR2AP28223 471 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 DNAJA1P31689 397 aaKnown RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 GCKP35557 465 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 MAGEA5P43359 124 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 TMED10P49755 219 aaKnown RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 TAS2R41P59536 307 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 PIN1Q13526 163 aaPredicted RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 NTRK2Q16620 822 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 HYAL4Q2M3T9 481 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 ENTPD8Q5MY95 495 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 ZNF585AQ6P3V2 769 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 PLEKHM3Q6ZWE6 761 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 RANBP3LQ86VV4 465 aaPredicted RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 GRAMD2AQ8IUY3 354 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 CMIPQ8IY22 773 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 TMCO5AQ8N6Q1 288 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 OR52J3Q8NH60 311 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 OIT3Q8WWZ8 545 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 SARAFQ96BY9 339 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 SLC29A1Q99808 456 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 TBL1XR1Q9BZK7 514 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 COQ10BQ9H8M1 238 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 TESQ9UGI8 421 aaKnown RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 SLC35A3Q9Y2D2 325 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 FAM215AQ9Y5M1 114 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
UPF1-208ENST00000600012 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
UPF1-208ENST00000600012 A0A0G2JNJ9 132 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 A0A1W2PQD3 144 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 FAM47E-STBD1D6RA91 191 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 TNFRSF11BO00300 401 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 ADAMDEC1O15204 470 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 NDUFB5O43674 189 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 GMFGO60234 142 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 GADD45GO95257 159 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 ANGPTL1O95841 491 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 P04436 131 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 FREM3P0C091 2139 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 GLI4P10075 376 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 FPR1P21462 350 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 CCR4P51679 360 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 ZNF117Q03924 483 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 FOXO1Q12778 655 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 SKP2Q13309 424 aa11.46□□□□□ -0.57
UPF1-208ENST00000600012 ZSWIM7Q19AV6 140 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms