RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ARHGAP11BQ3KRB8 267 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 SFRP5Q5T4F7 317 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ATAD3BQ5T9A4 648 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ZNF611Q8N823 705 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 C10orf82Q8WW14 230 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ST8SIA1Q92185 356 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 GTF2H4Q92759 462 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ZNF524Q96C55 264 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 NEURL3Q96EH8 262 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 OR5B2Q96R09 309 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ELAC2Q9BQ52 826 aaKnown RBP16.64■□□□□ 0.25
PNKP-213ENST00000599543 TMEM204Q9BSN7 226 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 THUMPD3Q9BV44 507 aaKnown RBP16.64■□□□□ 0.25
PNKP-213ENST00000599543 ZNF350Q9GZX5 532 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 LAT2Q9GZY6 243 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 PAIP1Q9H074 479 aaKnown RBP16.64■□□□□ 0.25
PNKP-213ENST00000599543 RMND5AQ9H871 391 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 NGBQ9NPG2 151 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 SLAMF8Q9P0V8 285 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 MKLN1Q9UL63 735 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 TRIM33Q9UPN9 1127 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 FCMRO60667 390 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 TMCC2O75069 709 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 UGT2B17O75795 530 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 LY6G6DO95868 133 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 AGR2O95994 175 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 ADAP00813 363 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 UBTFL6P0CB48 400 aaPredicted RBP16.63■□□□□ 0.25
PNKP-213ENST00000599543 LSP1P33241 339 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 FUT5Q11128 374 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 CAPRIN1Q14444 709 aaKnown RBP16.63■□□□□ 0.25
PNKP-213ENST00000599543 P2RY6Q15077 328 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 EIF3MQ7L2H7 374 aaKnown RBP16.63■□□□□ 0.25
PNKP-213ENST00000599543 ZNF619Q8N2I2 560 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 IGFBPL1Q8WX77 278 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 STON2Q8WXE9 905 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 TMEM234Q8WY98 164 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 HSD17B8Q92506 261 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 AKAP1Q92667 903 aaKnown RBP eCLIP16.63■□□□□ 0.25
PNKP-213ENST00000599543 PSD2Q9BQI7 771 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 ESRP2Q9H6T0 727 aaKnown RBP16.63■□□□□ 0.25
PNKP-213ENST00000599543 BCO1Q9HAY6 547 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 SERINC1Q9NRX5 453 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 KLHL14Q9P2G3 628 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 KCNE5Q9UJ90 142 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 RNF115Q9Y4L5 304 aa16.63■□□□□ 0.25
PNKP-213ENST00000599543 CENPVL1A0A0U1RR11 272 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 PRAMEF27A3QJZ7 478 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 CLOCKO15516 846 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 KIAA0513O60268 411 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 ETFAP13804 333 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 PAX1P15863 534 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 PGCP20142 388 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 KHKP50053 298 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 RASGEF1BQ0VAM2 473 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 MERTKQ12866 999 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 ITGADQ13349 1161 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 TAB1Q15750 504 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 HEPHL1Q6MZM0 1159 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 MSRB3Q8IXL7 192 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 TRIML2Q8N7C3 387 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 MIPOL1Q8TD10 442 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 USB1Q9BQ65 265 aaKnown RBP16.62■□□□□ 0.25
PNKP-213ENST00000599543 POTEKPQ9BYX7 375 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 QRSL1Q9H0R6 528 aaKnown RBP16.62■□□□□ 0.25
PNKP-213ENST00000599543 LAMP3Q9UQV4 416 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 PCDHB14Q9Y5E9 798 aa16.62■□□□□ 0.25
PNKP-213ENST00000599543 HMGN4O00479 90 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SMAD9O15198 467 aaKnown RBP16.61■□□□□ 0.25
PNKP-213ENST00000599543 DNAJA2O60884 412 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 H6PDO95479 791 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 CNOT4O95628 575 aaKnown RBP16.61■□□□□ 0.25
PNKP-213ENST00000599543 CD3EP07766 207 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 DRD4P21917 467 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 ATP5J2P56134 94 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SESN3P58005 492 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 HPCAP84074 193 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SYT14P1Q58G82 188 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 Q6ZT83 130 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 MSANTD1Q6ZTZ1 278 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 BHLHA15Q7RTS1 189 aaPredicted RBP16.61■□□□□ 0.25
PNKP-213ENST00000599543 RETREG3Q86VR2 466 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 ANKFN1Q8N957 763 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SLC25A43Q8WUT9 341 aaPredicted RBP16.61■□□□□ 0.25
PNKP-213ENST00000599543 OIT3Q8WWZ8 545 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SAR1AQ9NR31 198 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 ZNF701Q9NV72 531 aaPredicted RBP16.61■□□□□ 0.25
PNKP-213ENST00000599543 SLC25A37Q9NYZ2 338 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 ARMCX1Q9P291 453 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 SLC35A3Q9Y2D2 325 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 WDR45Q9Y484 360 aa16.61■□□□□ 0.25
PNKP-213ENST00000599543 A0A096LPI6 279 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 ZNF814B7Z6K7 855 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 SULT2B1O00204 365 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 CYTIPO60759 359 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 HOXB9P17482 250 aaPredicted RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 CRATP43155 626 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 OR3A2P47893 321 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms