RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SASH3O75995 380 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 SLC6A2P23975 617 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 OR2B6P58173 313 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 GUSBP1Q15486 140 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 LRIF1Q5T3J3 769 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 WBP2NLQ6ICG8 309 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
LIG1-218ENST00000599322 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 ZNF100Q8IYN0 542 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 STEAP2Q8NFT2 490 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 ABHD3Q8WU67 409 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 NINJ1Q92982 152 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 ZNF607Q96SK3 696 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 CCDC106Q9BWC9 280 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 SRXN1Q9BYN0 137 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 BCL2L10Q9HD36 194 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 TMEM181Q9P2C4 612 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
LIG1-218ENST00000599322 TMED7Q9Y3B3 224 aa12.62□□□□□ -0.39
LIG1-218ENST00000599322 IGHV3-15A0A0B4J1V0 119 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 CDHR4A6H8M9 788 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 ZNF208O43345 1280 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 CYTIPO60759 359 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 SERPINB7O75635 380 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 PMS2P2O95744 297 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 FESP07332 822 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 ETS2P15036 469 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 CD1EP15812 388 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 RPS4Y1P22090 263 aaKnown RBP12.61□□□□□ -0.39
LIG1-218ENST00000599322 IL32P24001 234 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 TACR3P29371 465 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 ARFIP2P53365 341 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 MVDP53602 400 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 SLC35A1P78382 337 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 CDK6Q00534 326 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 EPS8Q12929 822 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 KEAP1Q14145 624 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 RNF220Q5VTB9 566 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 GALNT5Q7Z7M9 940 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 FUNDC1Q8IVP5 155 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 BHLHE22Q8NFJ8 381 aaPredicted RBP12.61□□□□□ -0.39
LIG1-218ENST00000599322 PIGXQ8TBF5 258 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 ZC3HAV1LQ96H79 300 aaKnown RBP12.61□□□□□ -0.39
LIG1-218ENST00000599322 WFIKKN1Q96NZ8 548 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 TAPBPLQ9BX59 468 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 COQ10BQ9H8M1 238 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 SELENONQ9NZV5 590 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 TRAPPC4Q9Y296 219 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 TESMINQ9Y4I5 508 aa12.61□□□□□ -0.39
LIG1-218ENST00000599322 FAM221AA4D161 298 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 ZNF724A8MTY0 619 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 AP3D1O14617 1153 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 PGM3O95394 542 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 C1QCP02747 245 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 BMP2P12643 396 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 DNAJA1P31689 397 aaKnown RBP12.6□□□□□ -0.39
LIG1-218ENST00000599322 NCALDP61601 193 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 NFYCQ13952 458 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 P2RY6Q15077 328 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 POU4F3Q15319 338 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 MMEL1Q495T6 779 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 RPS26P11Q5JNZ5 115 aaPredicted RBP12.6□□□□□ -0.39
LIG1-218ENST00000599322 ANKRD34AQ69YU3 496 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 SPNS3Q6ZMD2 512 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 DHDDSQ86SQ9 333 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 ADGRG3Q86Y34 549 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 SLC35B4Q969S0 331 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 SH3GL1Q99961 368 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 RLIMQ9NVW2 624 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 PARPBPQ9NWS1 579 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 OSGIN1Q9UJX0 560 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 ANGPT4Q9Y264 503 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 DSPPQ9NZW4 1301 aa12.6□□□□□ -0.39
LIG1-218ENST00000599322 GPIP06744 558 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 ARAFP10398 606 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 CRYGSP22914 178 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 GTF2E2P29084 291 aaKnown RBP12.59□□□□□ -0.39
LIG1-218ENST00000599322 IDUAP35475 653 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 ART1P52961 327 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 CYLC2Q14093 348 aaPredicted RBP12.59□□□□□ -0.39
LIG1-218ENST00000599322 PDK3Q15120 406 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 CYP51A1Q16850 503 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 PAGE3Q5JUK9 113 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 SSX8Q7RTT4 187 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
LIG1-218ENST00000599322 C11orf65Q8NCR3 313 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms