RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 OR6T1Q8NGN1 323 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 ASB5Q8WWX0 329 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 SLC35B4Q969S0 331 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 OR5B2Q96R09 309 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 COQ3Q9NZJ6 369 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 CLEC4AQ9UMR7 237 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 ZNF175Q9Y473 711 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
SHKBP1-217ENST00000598558 A0A1B0GWA3 101 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 ZNF814B7Z6K7 855 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 NDUFAB1O14561 156 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 TNFSF13O75888 250 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 LYPD3O95274 346 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 THY1P04216 161 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 FESP07332 822 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 TMIGD3P0DMS9 266 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 NCK1P16333 377 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 BMP5P22003 454 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 CTSSP25774 331 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 HTR1EP28566 365 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 KIR2DL2P43627 348 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 RPS3AP61247 264 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 SYT14P1Q58G82 188 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 INTS11Q5TA45 600 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 C3orf33Q6P1S2 294 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 ERICH5Q6P6B1 374 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 RINLQ6ZS11 566 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 TMPPEQ6ZT21 453 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 CHMP1BQ7LBR1 199 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 TM9SF2Q99805 663 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 CACYBPQ9HB71 228 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 SERINC1Q9NRX5 453 aa12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 ING1Q9UK53 422 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-217ENST00000598558 A0A1W2PNV4 684 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 PRSS44E7EML9 344 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 SYT5O00445 386 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 RAMP1O60894 148 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 C8BP07358 591 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 TFPIP10646 304 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 FUT4P22083 530 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 MSX2P35548 267 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 HTR3AP46098 478 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 DIO1P49895 249 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 EGR4Q05215 589 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 MYBPHQ13203 477 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 OR1Q1Q15612 314 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 CYBRD1Q53TN4 286 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 PPP4R4Q6NUP7 873 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 VWA1Q6PCB0 445 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 P4HA3Q7Z4N8 544 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 BTLAQ7Z6A9 289 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 P3H2Q8IVL5 708 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 LSMEM1Q8N8F7 131 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 OR52E4Q8NGH9 312 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 STARD4Q96DR4 205 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 CDRT15Q96T59 188 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 ALG2Q9H553 416 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 STOML1Q9UBI4 398 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 ZNF629Q9UEG4 869 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 CD300AQ9UGN4 299 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 AP3M1Q9Y2T2 418 aa12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-217ENST00000598558 HECTD1Q9ULT8 2610 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 IGKV1D-42A0A075B6H8 117 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 GJE1A6NN92 205 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 B2RBV5 119 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 CXCR6O00574 342 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 ZNF208O43345 1280 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 NPIPB7O75200 414 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 CGAP01215 116 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 CXCR1P25024 350 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 SLC7A1P30825 629 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 OR1E2P47887 323 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 RAC3P60763 192 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 COPZ1P61923 177 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 SIRPAP78324 504 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 LRRC23Q53EV4 343 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 DEFB107AQ8IZN7 70 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 RBM15BQ8NDT2 890 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 ABHD3Q8WU67 409 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 MCHR1Q99705 422 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 SPAG4Q9NPE6 437 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 ADA2Q9NZK5 511 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 JKAMPQ9P055 326 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 EGFL7Q9UHF1 273 aa12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 KLF2Q9Y5W3 355 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-217ENST00000598558 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms