RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 GP6Q9HCN6 339 aa13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 SDR39U1Q9NRG7 319 aaPredicted RBP13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 ZIM2Q9NZV7 527 aa13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 TMED7Q9Y3B3 224 aa13.8□□□□□ -0.2
PPFIA4-208ENST00000597023 ITPR3Q14573 2671 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 CLOCKO15516 846 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 BCHEP06276 602 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 RPS4Y1P22090 263 aaKnown RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 FKBP2P26885 142 aaKnown RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 TACR3P29371 465 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 CSNK2A1P68400 391 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 ITGADQ13349 1161 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 STK11Q15831 433 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 GSTA3Q16772 222 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 C6orf10Q5SRN2 563 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 SLC2A7Q6PXP3 512 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 EPGNQ6UW88 154 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 BHLHA15Q7RTS1 189 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 MIER2Q8N344 545 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 SLC25A43Q8WUT9 341 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 RMND5AQ9H871 391 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 SLCO1B3Q9NPD5 702 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 OSGIN1Q9UJX0 560 aa13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 SPIN1Q9Y657 262 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 ZNF469Q96JG9 3925 aaPredicted RBP13.79□□□□□ -0.2
PPFIA4-208ENST00000597023 ZC3H12DA2A288 527 aaKnown RBP13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 ZNF724A8MTY0 619 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 TGDSO95455 350 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 NUDT7P0C024 238 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 IGHV1-2P23083 117 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 NTF4P34130 210 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 DSTNP60981 165 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 EPS8Q12929 822 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 TTMPQ5BVD1 217 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 SHEQ5VZ18 495 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 ABLIM2Q6H8Q1 611 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 ZNF836Q6ZNA1 936 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 PEX5LQ8IYB4 626 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 UBE2J2Q8N2K1 259 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 ITCHQ96J02 903 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 Q96MF0 132 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 PIP5K1AQ99755 562 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 EBF4Q9BQW3 602 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 PCDHB14Q9Y5E9 798 aa13.78□□□□□ -0.2
PPFIA4-208ENST00000597023 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 CFAP73A6NFT4 308 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 ZNF716A6NP11 495 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 ARHGEF9O43307 516 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 PMS2P2O95744 297 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 TFPTP0C1Z6 253 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 ZCCHC18P0CG32 403 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 IMPDH2P12268 514 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 IDH3AP50213 366 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 POLR2HP52434 150 aaKnown RBP13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 NR1H2P55055 460 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 GNA13Q14344 377 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 P2RY6Q15077 328 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 Q6ZT83 130 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 HDXQ7Z353 690 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 YTHDF3Q7Z739 585 aaKnown RBP13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 CIARTQ8N365 385 aaPredicted RBP13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 HSD17B8Q92506 261 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 GTF2H4Q92759 462 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 ZHX1-C8orf76Q96EF9 292 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 TMEM19Q96HH6 336 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 TMEM181Q9P2C4 612 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
PPFIA4-208ENST00000597023 PRR14LQ5THK1 2151 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 A0A1W2PR80 420 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 HS3ST1O14792 307 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 SMAD7O15105 426 aaKnown RBP13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 PRG2P13727 222 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 FOSL1P15407 271 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 ADSLP30566 484 aaPredicted RBP13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 SLC1A3P43003 542 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 HTR3AP46098 478 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 CRISP3P54108 245 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 BNIP2Q12982 314 aa13.76□□□□□ -0.21
PPFIA4-208ENST00000597023 NCMAPQ5T1S8 102 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms