RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SLC35B4Q969S0 331 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 OR5B2Q96R09 309 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 PSD2Q9BQI7 771 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 RLIMQ9NVW2 624 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 KLHL9Q9P2J3 617 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 ST6GALNAC2Q9UJ37 374 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 OSGIN1Q9UJX0 560 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 TRAPPC4Q9Y296 219 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 ITPR3Q14573 2671 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 TMED7-TICAM2A0A0A6YYA0 188 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 A0A1W2PPR1 153 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 TMEM247A6NEH6 219 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 SULT2B1O00204 365 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 NR5A2O00482 541 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 CASKO14936 926 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 SIAH2O43255 324 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF208O43345 1280 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ETS2P15036 469 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 PPP3CBP16298 524 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 GPX2P18283 190 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 PSMB1P20618 241 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 KCNJ5P48544 419 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 LARS2Q15031 903 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ABLIM2Q6H8Q1 611 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 TFAP2EQ6VUC0 442 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF836Q6ZNA1 936 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 MTDHQ86UE4 582 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 STK32CQ86UX6 486 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 GABRG1Q8N1C3 465 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 DPP10Q8N608 796 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ARL5BQ96KC2 179 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 SPATA9Q9BWV2 254 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 RSPO3Q9BXY4 272 aaPredicted RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 LIME1Q9H400 295 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 FANCFQ9NPI8 374 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF226Q9NYT6 803 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 EDARQ9UNE0 448 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF232Q9UNY5 417 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 TRIM33Q9UPN9 1127 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ZNF443Q9Y2A4 671 aaPredicted RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 IFT52Q9Y366 437 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 TMED7Q9Y3B3 224 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 ROS1P08922 2347 aa11.61□□□□□ -0.55
USE1-207ENST00000596136 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
USE1-207ENST00000596136 IGKV3D-15A0A087WSY6 115 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 IGHV3-15A0A0B4J1V0 119 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 GCM2O75603 506 aaPredicted RBP11.6□□□□□ -0.55
USE1-207ENST00000596136 PGM3O95394 542 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 ARAFP10398 606 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 UQCRBP14927 111 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 KLK2P20151 261 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 TACR3P29371 465 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 IST1P53990 364 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 H3F3AP84243 136 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 RASGEF1BQ0VAM2 473 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 EXOC3L2Q2M3D2 409 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 RPS26P11Q5JNZ5 115 aaPredicted RBP11.6□□□□□ -0.55
USE1-207ENST00000596136 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 CLIP4Q8N3C7 705 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 BBS10Q8TAM1 723 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 MAL2Q969L2 176 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
USE1-207ENST00000596136 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 HDHD5Q9BXW7 423 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 OR11A1Q9GZK7 315 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 IKZF5Q9H5V7 419 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 TMEM38AQ9H6F2 299 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 KLHL28Q9NXS3 571 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 TMEM181Q9P2C4 612 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 LEF1Q9UJU2 399 aaPredicted RBP11.6□□□□□ -0.55
USE1-207ENST00000596136 DCTN4Q9UJW0 460 aa11.6□□□□□ -0.55
USE1-207ENST00000596136 MED13LQ71F56 2210 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 TMEM72A0PK05 275 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ZNF814B7Z6K7 855 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 THBDP07204 575 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 FESP07332 822 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 GKN3PP0CG01 181 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 TFPIP10646 304 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 NCF2P19878 526 aaPredicted RBP11.59□□□□□ -0.55
USE1-207ENST00000596136 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
USE1-207ENST00000596136 OR3A2P47893 321 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 SLC16A1P53985 500 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ADRM1Q16186 407 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 RUNDC3AQ59EK9 446 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 GCNT6Q5T4J0 391 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 WBP2NLQ6ICG8 309 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 REEP3Q6NUK4 255 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms