RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FAM120BQ96EK7 910 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 AKTIPQ9H8T0 292 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 ATAD3AQ9NVI7 634 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 C7orf72A4D263 438 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 FAM157AC9JC47 383 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 SLCO1B7G3V0H7 640 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 SNNO75324 88 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 ACP2P11117 423 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 COX5AP20674 150 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 GABRA3P34903 492 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNF41P51814 821 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 TMEM176BQ3YBM2 270 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 EXOSC6Q5RKV6 272 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 P2RY8Q86VZ1 359 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 CEP70Q8NHQ1 597 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 PSMA8Q8TAA3 256 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 FBXO30Q8TB52 745 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 COQ8BQ96D53 544 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNF300Q96RE9 604 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 VRK1Q99986 396 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 NUF2Q9BZD4 464 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 MEAF6Q9HAF1 191 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 C3orf14Q9HBI5 128 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 TIGARQ9NQ88 270 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 ZCCHC3Q9NUD5 404 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 PNPOQ9NVS9 261 aa12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 MRTO4Q9UKD2 239 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-208ENST00000595726 TMPRSS2O15393 492 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 KCNH1O95259 989 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 C6orf47O95873 294 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 APEX1P27695 318 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 CLDN8P56748 225 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 LGALS3BPQ08380 585 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 DUSP5Q16690 384 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 MIDNQ504T8 468 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 KLHL17Q6TDP4 642 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 PEG10Q86TG7 708 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 LRRC34Q8IZ02 419 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 NATD1Q8N6N6 113 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 OR5P2Q8WZ92 322 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNF75CPQ92670 426 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 C16orf58Q96GQ5 468 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 PRPF18Q99633 342 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 PSD2Q9BQI7 771 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 DUSP26Q9BV47 211 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 GP6Q9HCN6 339 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 NKIRAS1Q9NYS0 192 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
SHKBP1-208ENST00000595726 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.48
SHKBP1-208ENST00000595726 CIB4A0PJX0 185 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ALG1L2C9J202 215 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 OXSR1O95747 527 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 HMGN2P05204 90 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 LINGO3P0C6S8 592 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 PRIM2P49643 509 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 FOXG1P55316 489 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 FOXF1Q12946 379 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 LASP1Q14847 261 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ZSWIM7Q19AV6 140 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ZNF100Q8IYN0 542 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ACTRT2Q8TDY3 377 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 FAM216AQ8WUB2 273 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 OTUB1Q96FW1 271 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 SNX18Q96RF0 628 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 BCO1Q9HAY6 547 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 THAP1Q9NVV9 213 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 PCDHGB1Q9Y5G3 927 aa12.02□□□□□ -0.49
SHKBP1-208ENST00000595726 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 A0A1W2PNR3 127 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 CCT8L1PA6NM43 557 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 SDHDO14521 159 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 ZNF195O14628 629 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 LILRA1O75019 489 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 KCNK2O95069 426 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 ALOX5P09917 674 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 ALDOCP09972 364 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 LBPP18428 481 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 CCT3P49368 545 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 RNF144AP50876 292 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 HBA1P69905 142 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 PHC1P78364 1004 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 RASGEF1BQ0VAM2 473 aa12.01□□□□□ -0.49
SHKBP1-208ENST00000595726 TP53BP2Q13625 1128 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms