RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 C11orf65Q8NCR3 313 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 RNASE6Q93091 150 aaKnown RBP13.54□□□□□ -0.24
ERCC1-217ENST00000592905 ARL5BQ96KC2 179 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 ZNF607Q96SK3 696 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 RBM24Q9BX46 236 aaKnown RBP13.54□□□□□ -0.24
ERCC1-217ENST00000592905 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
ERCC1-217ENST00000592905 ARMC7Q9H6L4 198 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 CHRNA9Q9UGM1 479 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 ANGPT4Q9Y264 503 aa13.54□□□□□ -0.24
ERCC1-217ENST00000592905 POLQO75417 2590 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 M0QX08 132 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 SULT2B1O00204 365 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 FAAHO00519 579 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 AIM2O14862 343 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 SLC22A2O15244 555 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 OPN1SWP03999 348 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 CRHP06850 196 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 FCGR2AP12318 317 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 UQCRBP14927 111 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 CPA2P48052 419 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 DIO1P49895 249 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 POLR2HP52434 150 aaKnown RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 CTBP2P56545 445 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 COPZ1P61923 177 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 DMTNQ08495 405 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 BNIP2Q12982 314 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 WBP2NLQ6ICG8 309 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 FAM214BQ7L5A3 538 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 NET1Q7Z628 596 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 SMYD1Q8NB12 490 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 PCYOX1LQ8NBM8 494 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 RP9Q8TA86 221 aaKnown RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ABHD3Q8WU67 409 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 WFDC6Q9BQY6 131 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 SPATA5L1Q9BVQ7 753 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ADAM19Q9H013 955 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 GID8Q9NWU2 228 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
ERCC1-217ENST00000592905 ZC3H12DA2A288 527 aaKnown RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 SERPINB7O75635 380 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 MFN2O95140 757 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 CXCR1P25024 350 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 PRKAR1BP31321 381 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 CPOXP36551 454 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 HTR3AP46098 478 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 RAC3P60763 192 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 RBBP4Q09028 425 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 MYBPHQ13203 477 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 GUSBP1Q15486 140 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 TMPPEQ6ZT21 453 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 SLC25A43Q8WUT9 341 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 ZNF775Q96BV0 537 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 LRRC46Q96FV0 321 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 GMPPAQ96IJ6 420 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 MYLK2Q9H1R3 596 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 PIGMQ9H3S5 423 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 C12orf49Q9H741 205 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 GALNT8Q9NY28 637 aa13.52□□□□□ -0.25
ERCC1-217ENST00000592905 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-217ENST00000592905 CCT8L1PA6NM43 557 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 A8MXE2 369 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 SMAD9O15198 467 aaKnown RBP13.51□□□□□ -0.25
ERCC1-217ENST00000592905 SS18L1O75177 396 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-217ENST00000592905 NPPAP01160 153 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 CGAP01215 116 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 FESP07332 822 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 PCBP3P57721 371 aaKnown RBP13.51□□□□□ -0.25
ERCC1-217ENST00000592905 OR2B6P58173 313 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 FAM27E3Q08E93 113 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 EXOC3L2Q2M3D2 409 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 VMACQ2NL98 169 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 EEF1A1P5Q5VTE0 462 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 GTF2IRD2BQ6EKJ0 949 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-217ENST00000592905 GTF2IRD2Q86UP8 949 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 TUSC5Q8IXB3 177 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 OR8J3Q8NGG0 315 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 LINC01560Q8TB33 94 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 RNF128Q8TEB7 428 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 C3orf49Q96BT1 292 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 ZNF583Q96ND8 569 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 SH3GL1Q99961 368 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 PROCRQ9UNN8 238 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 EMC9Q9Y3B6 208 aa13.51□□□□□ -0.25
ERCC1-217ENST00000592905 PDZD2O15018 2839 aa13.5□□□□□ -0.25
ERCC1-217ENST00000592905 PRORSD1PA6NEY8 169 aa13.5□□□□□ -0.25
ERCC1-217ENST00000592905 MSTNO14793 375 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms