RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TIA1P31483 386 aaKnown RBP eCLIP6.79□□□□□ -1.325e-17■■■■□ 20.3
VMP1-213ENST00000591877 SLCO1A2P46721 670 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 NAGLUP54802 743 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 PKNOX1P55347 436 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 VSNL1P62760 191 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 SLC25A3Q00325 362 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CFHR3Q02985 330 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CRYZQ08257 329 aaKnown RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 CEBPEQ15744 281 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 ZNF628Q5EBL2 1059 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 C1orf185Q5T7R7 199 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 WLSQ5T9L3 541 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 TMEM198Q66K66 360 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 SLC22A25Q6T423 547 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 ZYG11AQ6WRX3 759 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 B3GNT6Q6ZMB0 384 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 RHOUQ7L0Q8 258 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 ULK2Q8IYT8 1036 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CCNYL1Q8N7R7 359 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 LSMEM1Q8N8F7 131 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 GBP7Q8N8V2 638 aaPredicted RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 EIF1ADQ8N9N8 165 aaKnown RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 OR52R1Q8NGF1 315 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 IL17DQ8TAD2 202 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 ZNF675Q8TD23 568 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 C16orf78Q8WTQ4 265 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 KAT2AQ92830 837 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 EXOSC8Q96B26 276 aaKnown RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 SARAFQ96BY9 339 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 OMA1Q96E52 524 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 C14orf79Q96F83 325 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 ZNF597Q96LX8 424 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 JSRP1Q96MG2 331 aaPredicted RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 SECISBP2Q96T21 854 aaKnown RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 AIFM2Q9BRQ8 373 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 FAIM2Q9BWQ8 316 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 EBPLQ9BY08 206 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 DUSP22Q9NRW4 184 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 NMRK1Q9NWW6 199 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 BCAP29Q9UHQ4 241 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 UTS2RQ9UKP6 389 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 PSME2Q9UL46 239 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 EXO1Q9UQ84 846 aaKnown RBP6.79□□□□□ -1.32
VMP1-213ENST00000591877 CAMK2AQ9UQM7 478 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CCL27Q9Y4X3 112 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
VMP1-213ENST00000591877 CCDC168Q8NDH2 2452 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 CENPVL1A0A0U1RR11 272 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 GNG14A0A1W2PPG7 69 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 B4DXG7 233 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 TO15178 435 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ICOSLGO75144 302 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 UGT2B11O75310 529 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 GLRA3O75311 464 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 SNX4O95219 450 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 CHRM2P08172 466 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 MYL2P10916 166 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 DRD5P21918 477 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 PRPH2P23942 346 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 GDF1P27539 372 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 PPICP45877 212 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ZFP36L2P47974 494 aaKnown RBP6.78□□□□□ -1.32
VMP1-213ENST00000591877 TMED10P49755 219 aaKnown RBP6.78□□□□□ -1.32
VMP1-213ENST00000591877 CDK9P50750 372 aaKnown RBP6.78□□□□□ -1.32
VMP1-213ENST00000591877 DLX5P56178 289 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 PSG6Q00889 435 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 SLC18A2Q05940 514 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ACSM2AQ08AH3 577 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 EIPR1Q53HC9 387 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 SPIN4Q56A73 249 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 DCST1Q5T197 706 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 C6orf163Q5TEZ5 329 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ACSM2BQ68CK6 577 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 TMEM81Q6P7N7 255 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 KLHL24Q6TFL4 600 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 NPSR1Q6W5P4 371 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 NUP54Q7Z3B4 507 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 TDRPQ86YL5 185 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 WDSUB1Q8N9V3 476 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 OR7G2Q8NG99 324 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 OR10Q1Q8NGQ4 319 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 OR9A2Q8NGT5 310 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ASB10Q8WXI3 467 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.78□□□□□ -1.323e-9■■■■■ 60.4
VMP1-213ENST00000591877 AKAP1Q92667 903 aaKnown RBP eCLIP6.78□□□□□ -1.32
VMP1-213ENST00000591877 VSTM2LQ96N03 204 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 TIMP4Q99727 224 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 EXO5Q9H790 373 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 KCNJ16Q9NPI9 418 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 SLC35C2Q9NQQ7 365 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 CFL2Q9Y281 166 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 STK38LQ9Y2H1 464 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 C15orf41Q9Y2V0 281 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 SLC6A5Q9Y345 797 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 LYVE1Q9Y5Y7 322 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 ZNF780BQ9Y6R6 833 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
VMP1-213ENST00000591877 MED12LQ86YW9 2145 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms