RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 ISL1P61371 349 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 CXADRP78310 365 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SLC10A2Q12908 348 aaPredicted RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 HEPACAMQ14CZ8 416 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SF3A2Q15428 464 aaKnown RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SURF2Q15527 256 aaPredicted RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 ISXQ2M1V0 245 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 CTU2Q2VPK5 515 aaKnown RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 PCID2Q5JVF3 399 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 Q5PR19 223 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 ZNF691Q5VV52 312 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 LINC00696Q6ZRV3 163 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 LARP4Q71RC2 724 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 PIGZQ86VD9 579 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 AMIGO3Q86WK7 504 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SELENOHQ8IZQ5 122 aaKnown RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 MMP21Q8N119 569 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 HDDC3Q8N4P3 179 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 UBAC2Q8NBM4 344 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 OR5M9Q8NGP3 310 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 COQ8AQ8NI60 647 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 DPF1Q92782 380 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 UPRTQ96BW1 309 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 FBXO17Q96EF6 278 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 MMABQ96EY8 250 aaPredicted RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SENP8Q96LD8 212 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 RNF2Q99496 336 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 PKMYT1Q99640 499 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 HSD17B14Q9BPX1 270 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 DDA1Q9BW61 102 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 RAB34Q9BZG1 259 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 ACTL8Q9H568 366 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 NSUN3Q9H649 340 aaKnown RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SYNPO2LQ9H987 977 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SMPD4Q9NXE4 827 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 GTSE1Q9NYZ3 720 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 GSKIPQ9P0R6 139 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 GNG8Q9UK08 70 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 MRTO4Q9UKD2 239 aaKnown RBP5.22□□□□□ -1.57
LINC01538-201ENST00000588074 SLC35A3Q9Y2D2 325 aa5.22□□□□□ -1.57
LINC01538-201ENST00000588074 COL22A1Q8NFW1 1626 aaPredicted RBP5.21□□□□□ -1.57
LINC01538-201ENST00000588074 USP6P35125 1406 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 LOC102723996A0A087X1L8 192 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PRAMEF33A0A0G2JMD5 474 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 IQCMA0A1B0GVH7 501 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PRORSD1PA6NEY8 169 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CBY3A6NI87 242 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 GPR31O00270 319 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 GMFGO60234 142 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PRAMEF10O60809 474 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 RP2O75695 350 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 AQP8O94778 261 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CYB5R3P00387 301 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PTNP21246 168 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PTPN6P29350 595 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PXNP49023 591 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CEBPDP49716 269 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PPT1P50897 306 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MVDP53602 400 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 WNT4P56705 351 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 EMX2Q04743 252 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CHRNB3Q05901 458 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PIGFQ07326 219 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 LCP2Q13094 533 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 GAMTQ14353 236 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 SCGB2B2Q4G0G5 96 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 ZNF648Q5T619 568 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 LAIR2Q6ISS4 152 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 C8orf82Q6P1X6 216 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MOXD1Q6UVY6 613 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CES3Q6UWW8 571 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 PARS2Q7L3T8 475 aaKnown RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 TECPR1Q7Z6L1 1165 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CYP4Z1Q86W10 505 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CACUL1Q86Y37 369 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CLEC10AQ8IUN9 316 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 CFAP206Q8IYR0 622 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 APCDD1Q8J025 514 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 FAM89BQ8N5H3 189 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 C12orf76Q8N812 135 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 AQP11Q8NBQ7 271 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 OR13D1Q8NGV5 346 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 OR2G2Q8NGZ5 317 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 OLIG1Q8TAK6 271 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 SPPL2BQ8TCT7 592 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 SMIM12Q96EX1 92 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 KAZALD1Q96I82 304 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 APOLD1Q96LR9 279 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MS4A4EQ96PG1 132 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 RNF157Q96PX1 679 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MTERF1Q99551 399 aaKnown RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 SYT11Q9BT88 431 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 FTHL17Q9BXU8 183 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 ZNF430Q9H8G1 570 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MKKSQ9NPJ1 570 aaPredicted RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 MBNL1Q9NR56 388 aaKnown RBP5.21□□□□□ -1.58
LINC01538-201ENST00000588074 GPR173Q9NS66 373 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 SLCO1C1Q9NYB5 712 aa5.21□□□□□ -1.58
LINC01538-201ENST00000588074 IKZF3Q9UKT9 509 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms