RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ZNF527Q8NB42 609 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 OR10D3Q8NH80 312 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 SLC38A5Q8WUX1 472 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 IGFBPL1Q8WX77 278 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 TMEM19Q96HH6 336 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 SH3YL1Q96HL8 342 aaPredicted RBP13.98□□□□□ -0.17
SKA2-209ENST00000583976 SLC38A1Q9H2H9 487 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 PIF1Q9H611 641 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 NANOGQ9H9S0 305 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 POLE3Q9NRF9 147 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 CORO2BQ9UQ03 480 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 DTNAQ9Y4J8 743 aa13.98□□□□□ -0.17
SKA2-209ENST00000583976 CUBNO60494 3623 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 FAM171A2A8MVW0 826 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 NPIPB9F8W1W9 429 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 FXYD1O00168 92 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 GTPBP1O00178 669 aaKnown RBP13.97□□□□□ -0.17
SKA2-209ENST00000583976 KLF4O43474 513 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 KIAA0513O60268 411 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
SKA2-209ENST00000583976 FCGR2AP12318 317 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 NUDT2P50583 147 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 CRISP3P54108 245 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 NR1H2P55055 460 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 RPS3AP61247 264 aaKnown RBP13.97□□□□□ -0.17
SKA2-209ENST00000583976 MAPK14Q16539 360 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 SGCBQ16585 318 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 CYP51A1Q16850 503 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 NDUFAF6Q330K2 333 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 STAC2Q6ZMT1 411 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 FITM2Q8N6M3 262 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 OR6K3Q8NGY3 331 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 OR10A6Q8NH74 314 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 NFKBIDQ8NI38 313 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 RNF145Q96MT1 663 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 SAP130Q9H0E3 1048 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 A4GALTQ9NPC4 353 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 ARL8BQ9NVJ2 186 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 THUMPD1Q9NXG2 353 aaKnown RBP13.97□□□□□ -0.17
SKA2-209ENST00000583976 GMEB1Q9Y692 573 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 AP4B1Q9Y6B7 739 aa13.97□□□□□ -0.17
SKA2-209ENST00000583976 SONP18583 2426 aaKnown RBP13.97□□□□□ -0.17
SKA2-209ENST00000583976 FBN1P35555 2871 aaKnown RBP13.96□□□□□ -0.17
SKA2-209ENST00000583976 A0A1W2PQD3 144 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 SERINC4A6NH21 518 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 C5orf58C9J3I9 102 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 H3BNH8 94 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 TNFSF11O14788 317 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CXCL13O43927 109 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CYP7B1O75881 506 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CNOT4O95628 575 aaKnown RBP13.96□□□□□ -0.17
SKA2-209ENST00000583976 NPPAP01160 153 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 BMP2P12643 396 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 ZNF17P17021 662 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 IL11P20809 199 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 SHC1P29353 583 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 PRDX6P30041 224 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CDK6Q00534 326 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 FGFBP1Q14512 234 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 ZNF141Q15928 474 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 PRSS57Q6UWY2 283 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 WFDC8Q8IUA0 241 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 BDH2Q9BUT1 245 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 ACTR6Q9GZN1 396 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 C12orf49Q9H741 205 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 KAT8Q9H7Z6 458 aaKnown RBP13.96□□□□□ -0.17
SKA2-209ENST00000583976 MTHFD2LQ9H903 347 aaPredicted RBP13.96□□□□□ -0.17
SKA2-209ENST00000583976 MED17Q9NVC6 651 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CALML5Q9NZT1 146 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 EMC9Q9Y3B6 208 aa13.96□□□□□ -0.17
SKA2-209ENST00000583976 CLDN24A6NM45 220 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 OIP5O43482 229 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 PLGP00747 810 aaPredicted RBP13.95□□□□□ -0.18
SKA2-209ENST00000583976 GUSBP08236 651 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 ARAFP10398 606 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 PSMA4P25789 261 aaKnown RBP13.95□□□□□ -0.18
SKA2-209ENST00000583976 ZNF117Q03924 483 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 KRTAP1-1Q07627 177 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 GNA13Q14344 377 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 ADRM1Q16186 407 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 PLPPR5Q32ZL2 321 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 ALKBH2Q6NS38 261 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 CBLN3Q6UW01 205 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 ATG4DQ86TL0 474 aaPredicted RBP13.95□□□□□ -0.18
SKA2-209ENST00000583976 MISPQ8IVT2 679 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 PLPPR2Q96GM1 343 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 ECSITQ9BQ95 431 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 PRRG4Q9BZD6 226 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
SKA2-209ENST00000583976 A0A0G2JPF8 293 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms