RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RNF128Q8TEB7 428 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 ABHD3Q8WU67 409 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF607Q96SK3 696 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC39A3Q9BRY0 314 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 GLRX2Q9NS18 164 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 TMED7Q9Y3B3 224 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 CHST2Q9Y4C5 530 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SULT2B1O00204 365 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 CCDC22O60826 627 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 ENPP1P22413 925 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 PRKAR1BP31321 381 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 LSP1P33241 339 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 ACAA2P42765 397 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 KCNJ5P48544 419 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 DIO1P49895 249 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 RAC3P60763 192 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 CSNK2A1P68400 391 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 SORDQ00796 357 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 RBBP4Q09028 425 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 RNPS1Q15287 305 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 GUSBP1Q15486 140 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 ADRM1Q16186 407 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 COQ5Q5HYK3 327 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 WBP2NLQ6ICG8 309 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 TMPPEQ6ZT21 453 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 ADGRG3Q86Y34 549 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 PTOV1Q86YD1 416 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 ZZZ3Q8IYH5 903 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 POU5F2Q8N7G0 328 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 PCYOX1LQ8NBM8 494 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 OR6K3Q8NGY3 331 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 OR10A6Q8NH74 314 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 LRRC58Q96CX6 371 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 DDIT4LQ96D03 193 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 C14orf79Q96F83 325 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 OR11A1Q9GZK7 315 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 PIF1Q9H611 641 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 KAT8Q9H7Z6 458 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 OSGIN1Q9UJX0 560 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC13A4Q9UKG4 626 aa11.26□□□□□ -0.61
SMARCE1-218ENST00000582955 TMEM72A0PK05 275 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 PRORSD1PA6NEY8 169 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC22A2O15244 555 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 SERPINB7O75635 380 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 PRKD3O94806 890 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 FESP07332 822 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 CD8BP10966 210 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 CXCR1P25024 350 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 FKBP2P26885 142 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 AGTR1P30556 359 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 OR2B6P58173 313 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 GNGT1P63211 74 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 HOXC5Q00444 222 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 RABL3Q5HYI8 236 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 TMEM201Q5SNT2 666 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 NANOGP8Q6NSW7 305 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 DHRS4L2Q6PKH6 230 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 NET1Q7Z628 596 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 CPLX4Q7Z7G2 160 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 TMEM200AQ86VY9 491 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 LSRQ86X29 649 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 ARMC8Q8IUR7 673 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC43A2Q8N370 569 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF610Q8N9Z0 462 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 RCN3Q96D15 328 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 ZHX1-C8orf76Q96EF9 292 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 ARL5BQ96KC2 179 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 NANOGQ9H9S0 305 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 GID8Q9NWU2 228 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 KLHL9Q9P2J3 617 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 HDGFL3Q9Y3E1 203 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
SMARCE1-218ENST00000582955 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 FXYD1O00168 92 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 SMAD9O15198 467 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 TPST1O60507 370 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 PMS2P2O95744 297 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 NPPAP01160 153 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 CGAP01215 116 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 OPN1SWP03999 348 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 POU2F1P14859 743 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 KLK2P20151 261 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 DRD4P21917 467 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 CLK1P49759 484 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 NCALDP61601 193 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 FAM27E3Q08E93 113 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF474Q6S9Z5 364 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 MTDHQ86UE4 582 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 STK32CQ86UX6 486 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms