RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 EWSR1Q01844 656 aaKnown RBP eCLIP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 MOBPQ13875 183 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 PARP10Q53GL7 1025 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 KLF17Q5JT82 389 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 C1orf100Q5SVJ3 147 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 C12orf60Q5U649 245 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 TMEM61Q8N0U2 210 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 GCNT2Q8N0V5 402 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 KIR3DL3Q8N743 410 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 OR51S1Q8NGJ8 323 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 OR6X1Q8NH79 312 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 ZNF596Q8TC21 504 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC22A8Q8TCC7 542 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 SELENOMQ8WWX9 145 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 NDRG1Q92597 394 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 TMEM237Q96Q45 408 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 OR11A1Q9GZK7 315 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 EML4Q9HC35 981 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 KNSTRNQ9Y448 316 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 ALG6Q9Y672 507 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 V9GY05 133 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 CARMIL1Q5VZK9 1371 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 A6NIZ1 184 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 E7ESA3 106 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 E9PBE3 544 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 LAD1O00515 517 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 RASGRF2O14827 1237 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 OR4F21O95013 312 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 MBD3O95983 291 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 TBPP20226 339 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 CRISP3P54108 245 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 HSPA2P54652 639 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 STARD6P59095 220 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 RAP1BP61224 184 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 LY6EQ16553 131 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 NSUN5P1Q3KNT7 163 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 LINC00483Q53H64 154 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 FAM71E1Q6IPT2 247 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 RAB12Q6IQ22 244 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 RBM43Q6ZSC3 357 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 TPRA1Q86W33 373 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 C6orf223Q8N319 242 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 BRSK1Q8TDC3 778 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 TCTEX1D2Q8WW35 142 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 STARD8Q92502 1023 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 ARPC1AQ92747 370 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 TPK1Q9H3S4 243 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 NGBQ9NPG2 151 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 NINJ2Q9NZG7 142 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SMCHD1-206ENST00000581631 CLSPNQ9HAW4 1339 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 IGKV1D-8A0A087WSZ0 117 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 PPIAL4CA0A0B4J2A2 164 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 A0A0G2JLM5 398 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 RNF103-CHMP3A0A140T963 221 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 A0A1B0GUL7 405 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TMEM150BA6NC51 233 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 SERPINE3A8MV23 424 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 G3V4G9 280 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 MSH4O15457 936 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 LANCL1O43813 399 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 AIREO43918 545 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 CD5P06127 495 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 PNMA6AP0CW24 399 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 PPIAL4GP0DN37 164 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 FGF9P31371 208 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 MNAT1P51948 309 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 KPNA2P52292 529 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF763Q0D2J5 394 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 CCDC57Q2TAC2 916 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TRIM16LQ309B1 348 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 DEFB116Q30KQ4 102 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 PIGGQ5H8A4 983 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 GPRC6AQ5T6X5 926 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 GPR157Q5UAW9 335 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 CTRB2Q6GPI1 263 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TMIGD1Q6UXZ0 262 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF621Q6ZSS3 439 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 CATSPER4Q7RTX7 472 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 C6orf120Q7Z4R8 191 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 KIAA1328Q86T90 577 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF695Q8IW36 515 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 MRPL43Q8N983 215 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 DENND6BQ8NEG7 585 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 OR9G1Q8NH87 305 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ACER1Q8TDN7 264 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 GIMAP1Q8WWP7 306 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ST8SIA1Q92185 356 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 MYLPFQ96A32 169 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 MRPL38Q96DV4 380 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TIMD4Q96H15 378 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 C12orf66Q96MD2 445 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 FAM111AQ96PZ2 611 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 HIST1H4GQ99525 98 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 NAT9Q9BTE0 207 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 SELENOIQ9C0D9 397 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 RHBGQ9H310 441 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 SMPD3Q9NY59 655 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 AIPL1Q9NZN9 384 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 DEC1Q9P2X7 70 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms