RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 POLR2JP52435 117 aaKnown RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 MVDP53602 400 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 KCNJ10P78508 379 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 RNPS1Q15287 305 aaKnown RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 SYT14P1Q58G82 188 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 SLC2A7Q6PXP3 512 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 MSANTD1Q6ZTZ1 278 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 CXorf67Q86X51 503 aaPredicted RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 WFDC8Q8IUA0 241 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 SLC43A2Q8N370 569 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 WDR60Q8WVS4 1066 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 DYDC1Q8WWB3 177 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 C7orf26Q96N11 449 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 ALPK1Q96QP1 1244 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 ZNF300Q96RE9 604 aaPredicted RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 EBF4Q9BQW3 602 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 CCDC106Q9BWC9 280 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 OR11A1Q9GZK7 315 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 SERINC1Q9NRX5 453 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 THUMPD1Q9NXG2 353 aaKnown RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 NUP214P35658 2090 aaPredicted RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 FLNAP21333 2647 aaKnown RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 FAM234BA2RU67 622 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 NR5A2O00482 541 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 PRKD3O94806 890 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 CD53P19397 219 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 RPS4Y1P22090 263 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 LOXP28300 417 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 IDH2P48735 452 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 DIO1P49895 249 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 MAP2K6P52564 334 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 RAC3P60763 192 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 DSTNP60981 165 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 STX1BP61266 288 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 IRX1P78414 480 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 RASGEF1BQ0VAM2 473 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 GNA13Q14344 377 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 MAPK11Q15759 364 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 MRPL2Q5T653 305 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 EPGNQ6UW88 154 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 LRRC74BQ6ZQY2 392 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 BEND4Q6ZU67 534 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 GRINAQ7Z429 371 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 VRK2Q86Y07 508 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 SLC25A43Q8WUT9 341 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 S100PBPQ96BU1 408 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 MBD6Q96DN6 1003 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 THOC1Q96FV9 657 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 TMEM19Q96HH6 336 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 ITCHQ96J02 903 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 PSD2Q9BQI7 771 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 OR10A4Q9H209 315 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 RMND5AQ9H871 391 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 MTHFD2LQ9H903 347 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 TPT1P8Q9HAU6 139 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 TCF7L2Q9NQB0 619 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 EXOSC3Q9NQT5 275 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 RLIMQ9NVW2 624 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 KLHL9Q9P2J3 617 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 P2RX2Q9UBL9 471 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 CHRNA9Q9UGM1 479 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 PRSS50Q9UI38 385 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 ING1Q9UK53 422 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 SPIN1Q9Y657 262 aaPredicted RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 PRRC2AP48634 2157 aaKnown RBP8.87□□□□□ -0.99
RPA1-206ENST00000573994 C2CD3Q4AC94 2353 aa8.87□□□□□ -0.99
RPA1-206ENST00000573994 ACANP16112 2415 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 MPDZO75970 2070 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 CFAP73A6NFT4 308 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 SULT2B1O00204 365 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 CYTIPO60759 359 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 GCM2O75603 506 aaPredicted RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 DBIP07108 87 aaKnown RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 YES1P07947 543 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 GKN3PP0CG01 181 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 ZCCHC18P0CG32 403 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 CD99P14209 185 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 IL7RP16871 459 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 PSMB1P20618 241 aaKnown RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 IL32P24001 234 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 APOBEC1P41238 236 aaKnown RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 CLK1P49759 484 aaKnown RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 IDH3AP50213 366 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 AQP5P55064 265 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 OR2B6P58173 313 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 PPP2R2AP63151 447 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 FOXD4Q12950 439 aaPredicted RBP8.86□□□□□ -0.99
RPA1-206ENST00000573994 ZSWIM7Q19AV6 140 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 LIN52Q52LA3 116 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 ABLIM2Q6H8Q1 611 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 ZNF836Q6ZNA1 936 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 TMPPEQ6ZT21 453 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 TGIF2LYQ8IUE0 185 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 GABRG1Q8N1C3 465 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
RPA1-206ENST00000573994 WFDC11Q8NEX6 87 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms