RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PLEKHM3Q6ZWE6 761 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 Q71RC1 249 aaPredicted RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 GRINAQ7Z429 371 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 ADGRE4PQ86SQ3 457 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 MTDHQ86UE4 582 aaKnown RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 GTF2IRD2Q86UP8 949 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 ARMC8Q8IUR7 673 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 ZNF295-AS1Q8N0V1 137 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 POU5F2Q8N7G0 328 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 C11orf65Q8NCR3 313 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 FAM71CQ8NEG0 241 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 OR10A6Q8NH74 314 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 RP9Q8TA86 221 aaKnown RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 SLC25A43Q8WUT9 341 aaPredicted RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 CPNE4Q96A23 557 aaPredicted RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 LRRC58Q96CX6 371 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 DDIT4LQ96D03 193 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 DNAJA3Q96EY1 480 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 UCN2Q96RP3 112 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 CPPED1Q9BRF8 314 aaPredicted RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 SLC39A3Q9BRY0 314 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 IKZF5Q9H5V7 419 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 TMEM38AQ9H6F2 299 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 BCL2L10Q9HD36 194 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 DLL4Q9NR61 685 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 CTPS2Q9NRF8 586 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 KLHL28Q9NXS3 571 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 DNAJB12Q9NXW2 375 aaKnown RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 CHRNA9Q9UGM1 479 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 PACSIN3Q9UKS6 424 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 FLNAP21333 2647 aaKnown RBP6.98□□□□□ -1.29
SMG6-211ENST00000572369 DSPPQ9NZW4 1301 aa6.98□□□□□ -1.29
SMG6-211ENST00000572369 TMED7-TICAM2A0A0A6YYA0 188 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 A0A1W2PNV4 684 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SULT2B1O00204 365 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 AIM2O14862 343 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 ADAMDEC1O15204 470 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 EFNA2O43921 213 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 AQP8O94778 261 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 IL18BPO95998 194 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 CRHP06850 196 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 COX4I1P13073 169 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 FOSL1P15407 271 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 FKBP2P26885 142 aaKnown RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 SHC1P29353 583 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 TACR3P29371 465 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 CPOXP36551 454 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SLC1A3P43003 542 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 KCNJ5P48544 419 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 POLR2HP52434 150 aaKnown RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 CSNK2A1P68400 391 aaPredicted RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 EPS8Q12929 822 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 MYBPHQ13203 477 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SELPLGQ14242 412 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 CTU2Q2VPK5 515 aaKnown RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 SYT14P1Q58G82 188 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 RABL3Q5HYI8 236 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 COQ5Q5HYK3 327 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 INTS11Q5TA45 600 aaKnown RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 RNF220Q5VTB9 566 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 NANOGP8Q6NSW7 305 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 KIF18BQ86Y91 864 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SLC30A8Q8IWU4 369 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 C10orf111Q8N326 155 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 CLIP4Q8N3C7 705 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 RELL2Q8NC24 303 aaPredicted RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 BHLHE22Q8NFJ8 381 aaPredicted RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 ROBO4Q8WZ75 1007 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 RCN3Q96D15 328 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 ZHX1-C8orf76Q96EF9 292 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 CCDC106Q9BWC9 280 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 RBM24Q9BX46 236 aaKnown RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 PIGMQ9H3S5 423 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 NANOGQ9H9S0 305 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 SELENONQ9NZV5 590 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 FOXD3Q9UJU5 478 aaPredicted RBP6.97□□□□□ -1.29
SMG6-211ENST00000572369 CLEC4AQ9UMR7 237 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 PROCRQ9UNN8 238 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 TMED7Q9Y3B3 224 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 GMEB1Q9Y692 573 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 TGP01266 2768 aa6.97□□□□□ -1.29
SMG6-211ENST00000572369 VPS13CQ709C8 3753 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 IGHV3-15A0A0B4J1V0 119 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 M0QX08 132 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 FAAHO00519 579 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 FRS3O43559 492 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 SNX3O60493 162 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 DNAJA2O60884 412 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 ADAM11O75078 769 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 PRKD3O94806 890 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 NTN1O95631 604 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 OPN1SWP03999 348 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 PRG2P13727 222 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 DRD4P21917 467 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 ENPP1P22413 925 aa6.96□□□□□ -1.3
SMG6-211ENST00000572369 PRKAR1BP31321 381 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms