RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CREBBPQ92793 2442 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 TMED7-TICAM2A0A0A6YYA0 188 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 SULT2B1O00204 365 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 CYTIPO60759 359 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 PGM3O95394 542 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 PMS2P2O95744 297 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 HRGP04196 525 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 FESP07332 822 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 GKN3PP0CG01 181 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TROVE2P10155 538 aaKnown RBP eCLIP11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TFPIP10646 304 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 UQCRBP14927 111 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 GPX2P18283 190 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TACR3P29371 465 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 SLC1A3P43003 542 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 CSNK2A1P68400 391 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-220ENST00000569916 GUCY1A3Q02108 690 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 ZSWIM7Q19AV6 140 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 EXOC3L2Q2M3D2 409 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TMEM201Q5SNT2 666 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 METTL21CQ5VZV1 264 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 DHDDSQ86SQ9 333 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 CDC20BQ86Y33 519 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 DPP10Q8N608 796 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 NFKBIDQ8NI38 313 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 DNAJA3Q96EY1 480 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 WFIKKN1Q96NZ8 548 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 RSPO3Q9BXY4 272 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-220ENST00000569916 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 BCO1Q9HAY6 547 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 MED4Q9NPJ6 270 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 KLHL9Q9P2J3 617 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 CORO2BQ9UQ03 480 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 NDUFAF1Q9Y375 327 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 TMED7Q9Y3B3 224 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 HDGFL3Q9Y3E1 203 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 FREM1Q5H8C1 2179 aa11.6□□□□□ -0.55
CNOT1-220ENST00000569916 C5orf58C9J3I9 102 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ANGPT2O15123 496 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF208O43345 1280 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 DNPH1O43598 174 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 YES1P07947 543 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 PRG2P13727 222 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ETS2P15036 469 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 CCNA2P20248 432 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 DNAJA1P31689 397 aaKnown RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 CLK1P49759 484 aaKnown RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 CDK6Q00534 326 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 RASGEF1BQ0VAM2 473 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 POU4F3Q15319 338 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 HSP90B2PQ58FF3 399 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 RUNDC3AQ59EK9 446 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF311Q5JNZ3 666 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 TFAP2EQ6VUC0 442 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 STAC2Q6ZMT1 411 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 BEND4Q6ZU67 534 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 SERPINA11Q86U17 422 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 STK32CQ86UX6 486 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 TSPEARQ8WU66 669 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF300Q96RE9 604 aaPredicted RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ADAM19Q9H013 955 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 LIME1Q9H400 295 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 TMEM38AQ9H6F2 299 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 CACYBPQ9HB71 228 aaKnown RBP11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ITGB1BP2Q9UKP3 347 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF232Q9UNY5 417 aa11.59□□□□□ -0.55
CNOT1-220ENST00000569916 A0A1W2PPR1 153 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
CNOT1-220ENST00000569916 DEFB108AA8MXU0 73 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 SIAH2O43255 324 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 IMPDH2P12268 514 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 CRYGSP22914 178 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 PRKAR1BP31321 381 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ARFIP2P53365 341 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.567e-9■□□□□ 9.4
CNOT1-220ENST00000569916 SELPLGQ14242 412 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ADRM1Q16186 407 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 REEP3Q6NUK4 255 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
CNOT1-220ENST00000569916 GABRG1Q8N1C3 465 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 CADM2Q8N3J6 435 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ZHX1-C8orf76Q96EF9 292 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ANKRD27Q96NW4 1050 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 CGREF1Q99674 301 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 ARMC7Q9H6L4 198 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms