RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 ZNF573Q86YE8 665 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 CCDC71Q8IV32 467 aaPredicted RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 CCDC103Q8IW40 242 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 C9orf40Q8IXQ3 194 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 KLHL7Q8IXQ5 586 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 Q8N1Y9 231 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 TMEM156Q8N614 296 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 SLC15A4Q8N697 577 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 TMEM251Q8N6I4 163 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ZNF441Q8N8Z8 693 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ACOT4Q8N9L9 421 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 FAM47BQ8NA70 645 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ZNF680Q8NEM1 530 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 OR14A16Q8NHC5 309 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 NUBPLQ8TB37 319 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 SLC2A12Q8TD20 617 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ESAMQ96AP7 390 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 TMEM125Q96AQ2 219 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PTCD3Q96EY7 689 aaKnown RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 DGAT2Q96PD7 388 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 NR1H4Q96RI1 486 aaPredicted RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ATOH8Q96SQ7 321 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 RBBP8Q99708 897 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 CIB1Q99828 191 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 MAPKAP1Q9BPZ7 522 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 EFCAB11Q9BUY7 163 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ALOXE3Q9BYJ1 711 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 RTN4RQ9BZR6 473 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 UCK2Q9BZX2 261 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 CXXC4Q9H2H0 198 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 VCX2Q9H322 139 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 TP63Q9H3D4 680 aaPredicted RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PPANQ9NQ55 473 aaKnown RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 G6PC2Q9NQR9 355 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PNO1Q9NRX1 252 aaKnown RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PNPLA3Q9NST1 481 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 DNAJB11Q9UBS4 358 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 TMEFF2Q9UIK5 374 aaPredicted RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 OSGIN1Q9UJX0 560 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 FBXW2Q9UKT8 454 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 ERVK-11Q9UQG0 969 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 L3MBTL1Q9Y468 752 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 MAB21L2Q9Y586 359 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PLCE1Q9P212 2302 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 PCNX3Q9H6A9 2034 aa5.6□□□□□ -1.51
LINC00556-201ENST00000569603 FBN1P35555 2871 aaKnown RBP5.6□□□□□ -1.51
LINC00556-201ENST00000569603 CADP27708 2225 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 SVEP1Q4LDE5 3571 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 A0A0G2JNJ9 132 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 OOEPA6NGQ2 149 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 C17orf105B2RV13 164 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CCDC188H7C350 402 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 WWP2O00308 870 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CLDN4O14493 209 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 FGF17O60258 216 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 KLK8O60259 260 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 LDB3O75112 727 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 STK16O75716 305 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 IFNA14P01570 189 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 RFPL3SP0C7P2 107 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CCDC166P0CW27 439 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 HIST1H1TP22492 207 aaPredicted RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 MYF6P23409 242 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ACVR2AP27037 513 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 SOAT1P35610 550 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 MAGEA5P43359 124 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CCT3P49368 545 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 PCYT1AP49585 367 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ENTPD1P49961 510 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 HNRNPH2P55795 449 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ATP6V0D1P61421 351 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 PPIAP62937 165 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ILF2Q12905 390 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 SLC13A2Q13183 592 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 SNTB2Q13425 540 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 PDK4Q16654 411 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ZNF750Q32MQ0 723 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 GXYLT1Q4G148 440 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 TMEM35AQ53FP2 167 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 PLA1AQ53H76 456 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 PIGGQ5H8A4 983 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 FAM76BQ5HYJ3 339 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 FNDC7Q5VTL7 733 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 TRIM40Q6P9F5 258 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 RTL4Q6ZR62 310 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 GPSM1Q86YR5 675 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ZBED8Q8IZ13 594 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CENPLQ8N0S6 344 aaPredicted RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 EID3Q8N140 333 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 LRRC25Q8N386 305 aaPredicted RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 TMEM132CQ8N3T6 1108 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 FAM109AQ8N4B1 249 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 BPIFCQ8NFQ6 507 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 OR7G3Q8NG95 312 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ANGPTL6Q8NI99 470 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 CA5BP1Q8WTZ4 195 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 MITD1Q8WV92 249 aa5.59□□□□□ -1.51
LINC00556-201ENST00000569603 TSEN15Q8WW01 171 aaKnown RBP5.59□□□□□ -1.51
LINC00556-201ENST00000569603 ASB5Q8WWX0 329 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms