RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CRB3Q9BUF7 120 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 LAT2Q9GZY6 243 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 LHPPQ9H008 270 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 RACGAP1Q9H0H5 632 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ACOT13Q9NPJ3 140 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 FLRT3Q9NZU0 649 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 A0A087WUJ7 227 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 ALG1L2C9J202 215 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 GTPBP1O00178 669 aaKnown RBP13.37□□□□□ -0.27
COMMD4-221ENST00000567935 BMP7P18075 431 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 GRK5P34947 590 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 GPR4P46093 362 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 RNF4P78317 190 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
COMMD4-221ENST00000567935 SKP2Q13309 424 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 NCF4Q15080 339 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 SNAPC1Q16533 368 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 PGGHGQ32M88 737 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
COMMD4-221ENST00000567935 WDR88Q6ZMY6 472 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 TCEANCQ8N8B7 351 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 RNF217Q8TC41 542 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 PHOSPHO1Q8TCT1 267 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 RFKQ969G6 155 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 OMA1Q96E52 524 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 PLEKHA8Q96JA3 519 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 ADOQ96SZ5 270 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 CTRCQ99895 268 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 TSSK6Q9BXA6 273 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 CDCA4Q9BXL8 241 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 SLC39A1Q9NY26 324 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
COMMD4-221ENST00000567935 FBN2P35556 2912 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PMS2P1A4D2B8 440 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 EFCAB9A8MZ26 197 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PIP5K1CO60331 668 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 CNOT3O75175 753 aaKnown RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ENTPD6O75354 484 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 IGHEP01854 428 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 IGFBP1P08833 259 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 POU3F2P20265 443 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ACVR2AP27037 513 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ABCD3P28288 659 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 MASP1P48740 699 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 SLC9A3P48764 834 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 FOXK1P85037 733 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PIGFQ07326 219 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ST3GAL4Q11206 333 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 IRF3Q14653 427 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 GPR107Q5VW38 600 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 ACSM5Q6NUN0 579 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 KIRREL2Q6UWL6 708 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 NUP54Q7Z3B4 507 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 CADM2Q8N3J6 435 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 APCDD1LQ8NCL9 501 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 OR8D4Q8NGM9 314 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 FANK1Q8TC84 345 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 GRHL3Q8TE85 626 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 NMD3Q96D46 503 aaKnown RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 LIN37Q96GY3 246 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 IL4I1Q96RQ9 567 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 TMEM43Q9BTV4 400 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 TBL1XR1Q9BZK7 514 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PLA2G12AQ9BZM1 189 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 DSN1Q9H410 356 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 FN3KQ9H479 309 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 EGLN3Q9H6Z9 239 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 MRPS18AQ9NVS2 196 aaKnown RBP13.36□□□□□ -0.27
COMMD4-221ENST00000567935 PCDHGB6Q9Y5F9 930 aa13.36□□□□□ -0.27
COMMD4-221ENST00000567935 C2CD3Q4AC94 2353 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 PRODHO43272 600 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 TLX2O43763 284 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 PRKYO43930 277 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ICOSLGO75144 302 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ZFAND5O76080 213 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 FADS2O95864 444 aaKnown RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 TMED10P49755 219 aaKnown RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 SLC26A5P58743 744 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ANKDD1AQ495B1 522 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 KLHL22Q53GT1 634 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 SYT14P1Q58G82 188 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 SMARCD3Q6STE5 483 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF517Q6ZMY9 492 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ANKRD13BQ86YJ7 626 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 IQCF1Q8N6M8 205 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 C12orf43Q96C57 262 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms