RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 MBD3L2Q8NHZ7 208 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 CPNE4Q96A23 557 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 TAMM41Q96BW9 452 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF845Q96IR2 970 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 ABCD2Q9UBJ2 740 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 TESQ9UGI8 421 aaKnown RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 SH3GLB1Q9Y371 365 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF175Q9Y473 711 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 A0A0G2JNJ9 132 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ELOA3DA6NLF2 546 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-208ENST00000564703 SULT2B1O00204 365 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 DVL2O14641 736 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF208O43345 1280 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 CLDN14O95500 239 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 PLGP00747 810 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-208ENST00000564703 TMIGD3P0DMS9 266 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-208ENST00000564703 CTSSP25774 331 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ELOA3BQ3SY89 546 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ULK3Q6PHR2 472 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 SEM1Q6ZVN7 128 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 LSMEM1Q8N8F7 131 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ELOA3Q8NG57 546 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 FAM162AQ96A26 154 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 INTS12Q96CB8 462 aaKnown RBP14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ZHX1-C8orf76Q96EF9 292 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 TPD52L3Q96J77 140 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 MCHR1Q99705 422 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 KCNJ16Q9NPI9 418 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 CLCF1Q9UBD9 225 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF629Q9UEG4 869 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-208ENST00000564703 Q9UFV3 132 aa14.35□□□□□ -0.11
RAB40C-208ENST00000564703 FLNCQ14315 2725 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 A0A1W2PNR3 127 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 TOXO94900 526 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 TGM6O95932 706 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 PNMTP11086 282 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 TCN1P20061 433 aaPredicted RBP14.34□□□□□ -0.11
RAB40C-208ENST00000564703 HTR1EP28566 365 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 SHC1P29353 583 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 OPRM1P35372 400 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF136P52737 540 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 RAC3P60763 192 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 SELENOWP63302 87 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 CTU2Q2VPK5 515 aaKnown RBP14.34□□□□□ -0.11
RAB40C-208ENST00000564703 SPATS1Q496A3 300 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 CYBRD1Q53TN4 286 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 GLYATQ6IB77 296 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 TMPPEQ6ZT21 453 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 FKBP9P1Q75LS8 142 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 RNF148Q8N7C7 305 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 C9orf106Q8NAJ2 232 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 GPR32P1Q8NGA4 272 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 VANGL1Q8TAA9 524 aaPredicted RBP14.34□□□□□ -0.11
RAB40C-208ENST00000564703 FNDC9Q8TBE3 224 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 LRRC46Q96FV0 321 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 ADGRG7Q96K78 797 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 RSPO3Q9BXY4 272 aaPredicted RBP14.34□□□□□ -0.11
RAB40C-208ENST00000564703 HDGFL3Q9Y3E1 203 aa14.34□□□□□ -0.11
RAB40C-208ENST00000564703 TMEM72A0PK05 275 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 A8MVM7 634 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 KDM4EB2RXH2 506 aaPredicted RBP14.33□□□□□ -0.12
RAB40C-208ENST00000564703 M0R3H8 397 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 FMO6PO60774 539 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 ZNF682O95780 498 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 CRHP06850 196 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 CD247P20963 164 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 BMP5P22003 454 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 ENPP1P22413 925 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 IFNA8P32881 189 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 OR1Q1Q15612 314 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 NRF1Q16656 503 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 ALG10BQ5I7T1 473 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 PLXDC2Q6UX71 529 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 ARHGAP24Q8N264 748 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 SLC43A2Q8N370 569 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 C3orf49Q96BT1 292 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 POTEKPQ9BYX7 375 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 GLRX2Q9NS18 164 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 EGFL7Q9UHF1 273 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 RPS6KA6Q9UK32 745 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 TRAPPC4Q9Y296 219 aa14.33□□□□□ -0.12
RAB40C-208ENST00000564703 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
RAB40C-208ENST00000564703 A0A1B0GWA3 101 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 A1L4Q6 167 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 PMS2P2O95744 297 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 IL18BPO95998 194 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 RNF224P0DH78 156 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 T-ENOLP0DO92 83 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 HSD17B1P14061 328 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 GGT1P19440 569 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 DIO1P49895 249 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 CTBP2P56545 445 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 OR2B6P58173 313 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 SLC35A1P78382 337 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms