RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	FAM157C	P0CG43	387 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	GFAP	P14136	432 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	CSNK2A2	P19784	350 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	DRD4	P21917	467 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	IL12B	P29460	328 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	EVI2B	P34910	448 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SPR	P35270	261 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	IDUA	P35475	653 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	DEK	P35659	375 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ALDH9A1	P49189	494 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	MAPK12	P53778	367 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PNLIPRP2	P54317	469 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ALDH18A1	P54886	795 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	RPS4X	P62701	263 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	MRPS25	P82663	173 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PSG6	Q00889	435 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SLMAP	Q14BN4	828 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	TSC22D1	Q15714	1073 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SGCB	Q16585	318 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	CTU2	Q2VPK5	515 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PGGHG	Q32M88	737 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF628	Q5EBL2	1059 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SGO1	Q5FBB7	561 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	MTX3	Q5HYI7	312 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	C6orf52	Q5T4I8	152 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	GRTP1	Q5TC63	336 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	FRG2	Q64ET8	278 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ADAM5	Q6NVV9	412 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PGBD2	Q6P3X8	592 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	C3orf62	Q6ZUJ4	267 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	RPS27L	Q71UM5	84 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	COMMD6	Q7Z4G1	85 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	CTAGE3P	Q8IX95	158 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	METTL4	Q8N3J2	472 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	METTL25	Q8N6Q8	603 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF527	Q8NB42	609 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	OR4K17	Q8NGC6	315 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	OR9A2	Q8NGT5	310 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	RHEBL1	Q8TAI7	183 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	TRPC4AP	Q8TEL6	797 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PYROXD1	Q8WU10	500 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	CDKL2	Q92772	493 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	KAT2A	Q92830	837 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	KLHL29	Q96CT2	875 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	TRMT61A	Q96FX7	289 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	VSTM2L	Q96N03	204 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	FRG2B	Q96QU4	278 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SERPINI1	Q99574	410 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	NPAS1	Q99742	590 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	LRRC1	Q9BTT6	524 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ACTR6	Q9GZN1	396 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	MYLK2	Q9H1R3	596 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	NOL11	Q9H8H0	719 aa	Known RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ZBTB26	Q9HCK0	441 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SAYSD1	Q9NPB0	183 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	NRIP3	Q9NQ35	241 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PRODH2	Q9UF12	536 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	LIPT1	Q9Y234	373 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ACOT9	Q9Y305	439 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	SNX24	Q9Y343	169 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF175	Q9Y473	711 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	PLCE1	Q9P212	2302 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	ARFGEF3	Q5TH69	2177 aa		4.58	□□□□□ -1.68
TCF4-223	ENST00000564343	IGHV4-30-2	A0A087WSY4	118 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PRSS29P	A6NIE9	313 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SYCE1L	A8MT33	242 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PPP6C	O00743	305 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CLOCK	O15516	846 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	GMFG	O60234	142 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	FADS1	O60427	444 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SS18L1	O75177	396 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SKAP2	O75563	359 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	GCM2	O75603	506 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	NTN1	O95631	604 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PDYN	P01213	254 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CD8A	P01732	235 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	OPN1LW	P04000	364 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CSTB	P04080	98 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	C2	P06681	752 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PSMB1	P20618	241 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	IL11	P20809	199 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PTN	P21246	168 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	KRT20	P35900	424 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ARL1	P40616	181 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CCNG1	P51959	295 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	EEFSEC	P57772	596 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SSBP2	P81877	361 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ILF2	Q12905	390 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	TRAF3	Q13114	568 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	STX5	Q13190	355 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	EFR3A	Q14156	821 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	FGFBP1	Q14512	234 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ETFDH	Q16134	617 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	TMEM44	Q2T9K0	475 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms