RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 MEOX1P50221 254 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ARHGDIAP52565 204 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 DCST1Q5T197 706 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 C6orf52Q5T4I8 152 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SHQ1Q6PI26 577 aaKnown RBP11.71□□□□□ -0.53
SPG7-209ENST00000564047 ARSKQ6UWY0 536 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 Q6ZS92 163 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 GRINAQ7Z429 371 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SVOPLQ8N434 492 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ZFP62Q8NB50 900 aaPredicted RBP11.71□□□□□ -0.53
SPG7-209ENST00000564047 OR5K1Q8NHB7 308 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SLC38A4Q969I6 547 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 C3orf49Q96BT1 292 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ZNF524Q96C55 264 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 MRGPRX4Q96LA9 322 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ALPK1Q96QP1 1244 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PRSS27Q9BQR3 290 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 FUZQ9BT04 418 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PNPLA3Q9NST1 481 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 B4GALT7Q9UBV7 327 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 TUBD1Q9UJT1 453 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.53
SPG7-209ENST00000564047 U3KQV3 271 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 NBASA2RRP1 2371 aa11.71□□□□□ -0.54
SPG7-209ENST00000564047 SPTBN1Q01082 2364 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 A0A087WUJ7 227 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 TRBV4-1A0A0J9YWV2 114 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 GLSO94925 669 aaPredicted RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 NTN1O95631 604 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ZNF23P17027 643 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 FUT4P22083 530 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 DPP4P27487 766 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ADH6P28332 368 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 TACR3P29371 465 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 SRD5A2P31213 254 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 APOBEC1P41238 236 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 EIF1P41567 113 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 RBM34P42696 430 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 RPL5P46777 297 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 IST1P53990 364 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 MYBPC1Q00872 1141 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 PPP1R8Q12972 351 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 KCNAB2Q13303 367 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 APOFQ13790 326 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ZNF169Q14929 603 aaPredicted RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 EXOC3L2Q2M3D2 409 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 PLPPR5Q32ZL2 321 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 LINC00303Q3SY05 128 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 NHSL2Q5HYW2 709 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 FGD3Q5JSP0 725 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ATG4DQ86TL0 474 aaPredicted RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ZDHHC13Q8IUH4 622 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 EPHX4Q8IUS5 362 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 NKAIN4Q8IVV8 208 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 LINC00471Q8N535 108 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 FAM98AQ8NCA5 519 aaKnown RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 OR52J3Q8NH60 311 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 SLC7A13Q8TCU3 470 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ACOT11Q8WXI4 607 aaPredicted RBP11.7□□□□□ -0.54
SPG7-209ENST00000564047 CNBD2Q96M20 576 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 HS6ST2Q96MM7 605 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 CIB1Q99828 191 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ZNF426Q9BUY5 554 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 ADNPQ9H2P0 1102 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 UBQLN3Q9H347 655 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 VDAC3Q9Y277 283 aa11.7□□□□□ -0.54
SPG7-209ENST00000564047 A0A087WUU8 490 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 SH3PXD2BA1X283 911 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 ARRDC5A6NEK1 342 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 SAC3D1A6NKF1 404 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 G3V2T6 193 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 K7EM74 188 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 SOCS2O14508 198 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 CCNB2O95067 398 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 RFPL3SP0C7P2 107 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 HK1P19367 917 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 MAP2K6P52564 334 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 SH3BGRP55822 239 aaPredicted RBP11.69□□□□□ -0.54
SPG7-209ENST00000564047 PLGLB1Q02325 96 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 MERTKQ12866 999 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 FOXF1Q12946 379 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 MICAQ29983 383 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 ASB18Q6ZVZ8 466 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.69□□□□□ -0.54
SPG7-209ENST00000564047 TMEM179BQ7Z7N9 219 aa11.69□□□□□ -0.54
SPG7-209ENST00000564047 RNF113BQ8IZP6 322 aaKnown RBP11.69□□□□□ -0.54
SPG7-209ENST00000564047 RBMXL3Q8N7X1 1067 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms