RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PARP8Q8N3A8 854 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 HAS2Q92819 552 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 BPIFA2Q96DR5 249 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 JSRP1Q96MG2 331 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 GNRHR2Q96P88 292 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TMEM43Q9BTV4 400 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 PIEZO1Q92508 2521 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 APC2O95996 2303 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 TMED7-TICAM2A0A0A6YYA0 188 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 CDC42EP2O14613 210 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 SLC16A6O15403 523 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 EFNA2O43921 213 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 CLIC3O95833 236 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 GNAO1P09471 354 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 OSMP13725 252 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 CDH2P19022 906 aaPredicted RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 FUT1P19526 365 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 CXCR1P25024 350 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 FPR3P25089 353 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 HTR3AP46098 478 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 ZNF41P51814 821 aaPredicted RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 FOXK1P85037 733 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 ALDH6A1Q02252 535 aaKnown RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 CRYZQ08257 329 aaKnown RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 COX10Q12887 443 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 FOXF1Q12946 379 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 CMPK2Q5EBM0 449 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 WLSQ5T9L3 541 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 Q6ZPB1 254 aaPredicted RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 TMPRSS11FQ6ZWK6 438 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 USP51Q70EK9 711 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 KIF18BQ86Y91 864 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 ZNF555Q8NEP9 628 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 DCBLD2Q96PD2 775 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 PTGES2Q9H7Z7 377 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 KRCC1Q9NPI7 259 aaPredicted RBP9.21□□□□□ -0.93
SMG1-208ENST00000563448 TMED7Q9Y3B3 224 aa9.21□□□□□ -0.93
SMG1-208ENST00000563448 ACACAQ13085 2346 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 LOC100130705A0A1B0GUX0 176 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 LRRC3CA6NJW4 275 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 ENO4A6NNW6 628 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SUSD5O60279 629 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 CBR3O75828 277 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SOX14O95416 240 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SP1P08047 785 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 GSTM3P21266 225 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 CHMP24386 653 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 APOBEC1P41238 236 aaKnown RBP9.21□□□□□ -0.94
SMG1-208ENST00000563448 CRISP1P54107 249 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 DSCR4P56555 118 aaPredicted RBP9.21□□□□□ -0.94
SMG1-208ENST00000563448 ARG2P78540 354 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 MED21Q13503 144 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 TTC23Q5W5X9 447 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SLC25A25Q6KCM7 469 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SULF2Q8IWU5 870 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 OR2M7Q8NG81 312 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SLC39A7Q92504 469 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 MRGPRX4Q96LA9 322 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 CNBD2Q96M20 576 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 ZNF570Q96NI8 536 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 ANKRD60Q9BZ19 345 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 SLC19A3Q9BZV2 496 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 Q9H521 79 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 EGLN3Q9H6Z9 239 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 UBAP1Q9NZ09 502 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 TMEM5Q9Y2B1 443 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 PCDHGB6Q9Y5F9 930 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 PCDHGB5Q9Y5G0 923 aa9.21□□□□□ -0.94
SMG1-208ENST00000563448 ZC3H12DA2A288 527 aaKnown RBP9.2□□□□□ -0.94
SMG1-208ENST00000563448 UNC119BA6NIH7 251 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 NME2P1O60361 137 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 ZIC3O60481 467 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 RFPL3SP0C7P2 107 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 IL11P20809 199 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 NME2P22392 152 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 TCEA1P23193 301 aaKnown RBP9.2□□□□□ -0.94
SMG1-208ENST00000563448 MYF6P23409 242 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 DPP4P27487 766 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 ESRRGP62508 458 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 TLE3Q04726 772 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 FOXO1Q12778 655 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 PTGES3Q15185 160 aaKnown RBP9.2□□□□□ -0.94
SMG1-208ENST00000563448 RASSF6Q6ZTQ3 369 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 SLC46A3Q7Z3Q1 461 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 MARVELD2Q8N4S9 558 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 OR5M1Q8NGP8 315 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 KTI12Q96EK9 354 aaPredicted RBP9.2□□□□□ -0.94
SMG1-208ENST00000563448 SGTBQ96EQ0 304 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 MUS81Q96NY9 551 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 PITX2Q99697 317 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 SMAD5Q99717 465 aaKnown RBP9.2□□□□□ -0.94
SMG1-208ENST00000563448 FAM173AQ9BQD7 235 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 PLA2G12AQ9BZM1 189 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG1-208ENST00000563448 KLHL1Q9NR64 748 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 NDRG4Q9ULP0 352 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms