RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ELOA3Q8NG57 546 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 PHOSPHO1Q8TCT1 267 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZNF721Q8TF20 911 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DAZLQ92904 295 aaKnown RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TMED9Q9BVK6 235 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NXF5Q9H1B4 397 aaKnown RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CHRNA9Q9UGM1 479 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 A0A1B0GX78 115 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZC3H12DA2A288 527 aaKnown RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SBK2P0C263 348 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ATXN8OSP0DMR3 200 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TAS2R43P59537 309 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 HLA-DQA1Q5Y7H0 255 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 FCRLBQ6BAA4 426 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 B3GLCTQ6Y288 498 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 UBALD2Q8IYN6 164 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZNF321PQ8N8H1 164 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 FAM98AQ8NCA5 519 aaKnown RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 OR5M3Q8NGP4 307 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ASB15Q8WXK1 588 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 PHOX2BQ99453 314 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ELF4Q99607 663 aaPredicted RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DPYSL5Q9BPU6 564 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TMEM43Q9BTV4 400 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 KATNB1Q9BVA0 655 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 KCNN2Q9H2S1 579 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ADGRL4Q9HBW9 690 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 POLE4Q9NR33 117 aa19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 PLEKHB1Q9UF11 243 aaPredicted RBP19.57■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 A8MU76 341 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CASKO14936 926 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TOX3O15405 576 aaPredicted RBP19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZNF264O43296 627 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 IDH3BO43837 385 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 REM1O75628 298 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CLEC2LP0C7M8 214 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 GIMD1P0DJR0 217 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 LGALS3BPQ08380 585 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SKP2Q13309 424 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TRAM1Q15629 374 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ISXQ2M1V0 245 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DDI2Q5TDH0 399 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 LCN1P1Q5VSP4 162 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 MARCH9Q86YJ5 346 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ADIPOR1Q96A54 375 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 LMF1Q96S06 567 aa19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZNF768Q9H5H4 540 aaKnown RBP19.56■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 C2orf92A0A1B0GVN3 265 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 GABRPO00591 440 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 RNF13O43567 381 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 RGS9O75916 674 aaPredicted RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SLC6A8P48029 635 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 PRPS1P60891 318 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 LAX1Q8IWV1 398 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 OR52E2Q8NGJ4 325 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SMPDL3BQ92485 455 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ISG20L2Q9H9L3 353 aaKnown RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 COPS7AQ9UBW8 275 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ARPC3O15145 178 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 APOA1P02647 267 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DCNP07585 359 aaKnown RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 RPL4P36578 427 aaKnown RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 RGS19P49795 217 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZP2Q05996 745 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NSDHLQ15738 373 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CD226Q15762 336 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ATG4DQ86TL0 474 aaPredicted RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 GATSQ8NAP1 163 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 POMGNT2Q8NAT1 580 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CYB561A3Q8NBI2 242 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 ZNF501Q96CX3 271 aaPredicted RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TBX5Q99593 518 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CDX2Q99626 313 aaPredicted RBP19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NUDT9Q9BW91 350 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 HDHD5Q9BXW7 423 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 C12orf10Q9HB07 376 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 FGF21Q9NSA1 209 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SRPK3Q9UPE1 567 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 IER3IP1Q9Y5U9 82 aa19.55■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TP53BP1Q12888 1972 aaPredicted RBP19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SPAG17Q6Q759 2223 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 OR6C76A6NM76 312 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 FOSL2P15408 326 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 PNLIPP16233 465 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CFL1P23528 166 aaKnown RBP19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 IL12BP29460 328 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 GRK6P43250 576 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CCR4P51679 360 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DMWDQ09019 674 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NUP210LQ5VU65 1888 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SYT14Q8NB59 555 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 KNL1Q8NG31 2342 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 OR5W2Q8NH69 310 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NEIL3Q8TAT5 605 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 SETD6Q8TBK2 473 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 CCDC74AQ96AQ1 378 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 TMCO6Q96DC7 493 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 GAL3ST4Q96RP7 486 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 DUSP23Q9BVJ7 150 aa19.54■□□□□ 0.72
VPS9D1-AS1-202ENST00000562866 NDEL1Q9GZM8 345 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms