RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TMPPEQ6ZT21 453 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 FAM214BQ7L5A3 538 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF550Q7Z398 422 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 OR8J3Q8NGG0 315 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 RP9Q8TA86 221 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 CPNE4Q96A23 557 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 RCN3Q96D15 328 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 OR5B2Q96R09 309 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 WFDC6Q9BQY6 131 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 PRRG4Q9BZD6 226 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 OR11A1Q9GZK7 315 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 CLEC4AQ9UMR7 237 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 TMEM72A0PK05 275 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 CD8BP10966 210 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 COX4I1P13073 169 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 SLC7A1P30825 629 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 UQCRC1P31930 480 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 PCGF2P35227 344 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 DIO1P49895 249 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 CRYBA2P53672 197 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 SIRPAP78324 504 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 SNTB1Q13884 538 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 MMEL1Q495T6 779 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 WBP2NLQ6ICG8 309 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF474Q6S9Z5 364 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 PIGWQ7Z7B1 504 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 LUZP2Q86TE4 346 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 KRT73Q86Y46 540 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 ABHD3Q8WU67 409 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF583Q96ND8 569 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 GPATCH1Q9BRR8 931 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 SPATA5L1Q9BVQ7 753 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 TIGARQ9NQ88 270 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 GLRX2Q9NS18 164 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 USP22Q9UPT9 525 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 ANGPT4Q9Y264 503 aa13.63□□□□□ -0.23
SNRPA1-213ENST00000560856 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 ZC3H12DA2A288 527 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 M0QX08 132 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 SMAD9O15198 467 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF208O43345 1280 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 TPST2O60704 377 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 CCNA2P20248 432 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 FKBP2P26885 142 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 PCYT1AP49585 367 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 MYBPHQ13203 477 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 DUSP7Q16829 419 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 VMACQ2NL98 169 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 PPP4R4Q6NUP7 873 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 C8orf82Q6P1X6 216 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 CCDC80Q76M96 950 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 FCRLAQ7L513 359 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 CPLX4Q7Z7G2 160 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF610Q8N9Z0 462 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 GPR32P1Q8NGA4 272 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 C3orf49Q96BT1 292 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 C14orf79Q96F83 325 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF607Q96SK3 696 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 RBM24Q9BX46 236 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 NSRP1Q9H0G5 558 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 OPN3Q9H1Y3 402 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 PIF1Q9H611 641 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 CACYBPQ9HB71 228 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 PLSCR4Q9NRQ2 329 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 GID8Q9NWU2 228 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 GALNT8Q9NY28 637 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 HDGFL3Q9Y3E1 203 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 SPIN1Q9Y657 262 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 ABCA4P78363 2273 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
SNRPA1-213ENST00000560856 SPG11Q96JI7 2443 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 IGHV3-15A0A0B4J1V0 119 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 PRORSD1PA6NEY8 169 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 SULT2B1O00204 365 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 CYTIPO60759 359 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 SERPINB7O75635 380 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 PMS2P2O95744 297 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 TFPIP10646 304 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 IMPDH2P12268 514 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 UQCRBP14927 111 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 CD247P20963 164 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 HTR2AP28223 471 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 AGTR1P30556 359 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 MAP2K6P52564 334 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 H3F3AP84243 136 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 ATG4DQ86TL0 474 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 ARMC8Q8IUR7 673 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 SLC30A8Q8IWU4 369 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 SLC43A2Q8N370 569 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms