RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CBX1P83916 185 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 MXRA7P84157 204 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 PON3Q15166 354 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 PDSS1Q5T2R2 415 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 LIX1LQ8IVB5 337 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 DEFB107AQ8IZN7 70 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 RNF148Q8N7C7 305 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 LSMEM1Q8N8F7 131 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 FNDC9Q8TBE3 224 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 C3orf49Q96BT1 292 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 CDRT15Q96T59 188 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 KCTD14Q9BQ13 255 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 EVA1AQ9H8M9 152 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 COQ3Q9NZJ6 369 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 ZNF175Q9Y473 711 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 SLC22A20A6NK97 555 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 CXCR6O00574 342 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 GSTA4O15217 222 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 RCBTB2O95199 551 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 IFNA14P01570 189 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 CALB2P22676 271 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 CHRNB4P30926 498 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 LRRC23Q53EV4 343 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 CYBRD1Q53TN4 286 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 SYT14P1Q58G82 188 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 C16orf89Q6UX73 402 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 RINLQ6ZS11 566 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 RBM45Q8IUH3 476 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 RBM15BQ8NDT2 890 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 OR52E4Q8NGH9 312 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 LILRB4Q8NHJ6 448 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 SLC25A43Q8WUT9 341 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 RASSF5Q8WWW0 418 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 ASB5Q8WWX0 329 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 ARL5BQ96KC2 179 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 OR5B2Q96R09 309 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 TM9SF2Q99805 663 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 ZNF559Q9BR84 538 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 SRXN1Q9BYN0 137 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 OR11A1Q9GZK7 315 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 PAQR5Q9NXK6 330 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 CD300AQ9UGN4 299 aa18.19■□□□□ 0.5
TSPAN3-207ENST00000559494 A0A1B0GWA3 101 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 HSPB2A8KAH6 182 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 AQP8O94778 261 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 CLDN1O95832 211 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 TFPIP10646 304 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 CXCR1P25024 350 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 HTR1EP28566 365 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 SLC7A1P30825 629 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 FOXF2Q12947 444 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 BNIP2Q12982 314 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 OR1Q1Q15612 314 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 NPTX1Q15818 432 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 HSPB2Q16082 182 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 P4HA3Q7Z4N8 544 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 ATG4DQ86TL0 474 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 FAM156AQ8NDB6 213 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 OR6T1Q8NGN1 323 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 INTS12Q96CB8 462 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 TRIM2Q9C040 744 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 NDE1Q9NXR1 346 aa18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 TESQ9UGI8 421 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 SPIN1Q9Y657 262 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-207ENST00000559494 A1L4Q6 167 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 ZC3H12DA2A288 527 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 ZNF208O43345 1280 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 UBOX5O94941 541 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 TMIGD3P0DMS9 266 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 HSD17B1P14061 328 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 NCK1P16333 377 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 GGT1P19440 569 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 TNFRSF1BP20333 461 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 FKBP2P26885 142 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 CLK1P49759 484 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 SELENOWP63302 87 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 TMPPEQ6ZT21 453 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 VANGL1Q8TAA9 524 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 CA5BP1Q8WTZ4 195 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 ROBO4Q8WZ75 1007 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 DNAJA3Q96EY1 480 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 MCHR1Q99705 422 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 UCK2Q9BZX2 261 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 RPS6KB2Q9UBS0 482 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 EGFL7Q9UHF1 273 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 BAG5Q9UL15 447 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 SH3GLB1Q9Y371 365 aa18.17■□□□□ 0.5
TSPAN3-207ENST00000559494 SYNGR4O95473 234 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 CLDN14O95500 239 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 CTSSP25774 331 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 MSX2P35548 267 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 MAP2K6P52564 334 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 AGFG1P52594 562 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 RAC3P60763 192 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 MYBPHQ13203 477 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 SAMD4BQ5PRF9 694 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 PPP4R4Q6NUP7 873 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 GCNT2Q8N0V5 402 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 PROX1Q92786 737 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 PRRG4Q9BZD6 226 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms