RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 RNF122Q9H9V4 155 aa14.2□□□□□ -0.14
RABGGTA-206ENST00000558649 EFCAB1Q9HAE3 211 aa14.2□□□□□ -0.14
RABGGTA-206ENST00000558649 NPDC1Q9NQX5 325 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-206ENST00000558649 FAM53CQ9NYF3 392 aa14.2□□□□□ -0.14
RABGGTA-206ENST00000558649 OSGIN1Q9UJX0 560 aa14.2□□□□□ -0.14
RABGGTA-206ENST00000558649 M0QX08 132 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 SULT2B1O00204 365 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 GCM2O75603 506 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 DCTN3O75935 186 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 MFN2O95140 757 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 IL18BPO95998 194 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 CXCR1P25024 350 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 DLX5P56178 289 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 RGS8P57771 180 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 SNTB1Q13884 538 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 INTS11Q5TA45 600 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 MEX3BQ6ZN04 569 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 PATL1Q86TB9 770 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 CALHM3Q86XJ0 350 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 DDIT4LQ96D03 193 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 ARL5BQ96KC2 179 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 LRRC37BQ96QE4 947 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 KLHL28Q9NXS3 571 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 RPS6KB2Q9UBS0 482 aa14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 SPTBN1Q01082 2364 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-206ENST00000558649 FAM220BPB1ANY3 271 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 M0R3H8 397 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 TNFSF13O75888 250 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 FESP07332 822 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 KLK2P20151 261 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 CPOXP36551 454 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 DIO1P49895 249 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 SLC7A2P52569 658 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 CTBP2P56545 445 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 BNIP2Q12982 314 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 MYBPHQ13203 477 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 GKAP1Q5VSY0 366 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 FCRLAQ7L513 359 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 ARPINQ7Z6K5 226 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 BHLHE22Q8NFJ8 381 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 OR2T12Q8NG77 320 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 VANGL1Q8TAA9 524 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 RNF217Q8TC41 542 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 ABHD3Q8WU67 409 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 TAMM41Q96BW9 452 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 LRRC46Q96FV0 321 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 ZNF583Q96ND8 569 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 PRR14Q9BWN1 585 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 CMTM6Q9NX76 183 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 GMPR2Q9P2T1 348 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 PACSIN3Q9UKS6 424 aa14.18□□□□□ -0.14
RABGGTA-206ENST00000558649 ZC3H12DA2A288 527 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 FAM107AO95990 144 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 CRHP06850 196 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 ENPP1P22413 925 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 HTR2AP28223 471 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 PRDX6P30041 224 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 KIR2DL2P43627 348 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 OR2B6P58173 313 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 RAC3P60763 192 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 CSNK2A1P68400 391 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 LIPEQ05469 1076 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 DUSP7Q16829 419 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 LRRC23Q53EV4 343 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 ERICH5Q6P6B1 374 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 TMPPEQ6ZT21 453 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 BTLAQ7Z6A9 289 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 OR52E4Q8NGH9 312 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 RNF128Q8TEB7 428 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 C3orf49Q96BT1 292 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 STARD4Q96DR4 205 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 GMPPAQ96IJ6 420 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 WFDC6Q9BQY6 131 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 GPATCH1Q9BRR8 931 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 ADAM19Q9H013 955 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 OPN3Q9H1Y3 402 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 PIGMQ9H3S5 423 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 EMC9Q9Y3B6 208 aa14.17□□□□□ -0.14
RABGGTA-206ENST00000558649 INTS1Q8N201 2190 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 ELOA3DA6NLF2 546 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 NME4O00746 187 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 SMAD9O15198 467 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 HNRNPRO43390 633 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 SHOX2O60902 331 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 CD247P20963 164 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 ELOA3BQ3SY89 546 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 HACD2Q6Y1H2 254 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 FAM214BQ7L5A3 538 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 RANBP3LQ86VV4 465 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 SLC15A3Q8IY34 581 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 MICU2Q8IYU8 434 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 CCDC197Q8NCU1 140 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 ELOA3Q8NG57 546 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 GPR32P1Q8NGA4 272 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 SLC35B4Q969S0 331 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 ZHX1-C8orf76Q96EF9 292 aa14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 HOPXQ9BPY8 73 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-206ENST00000558649 ZNF559Q9BR84 538 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms