RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 DPP4P27487 766 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 SHMT2P34897 504 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 MNDAP41218 407 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CLK1P49759 484 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 ASCL1P50553 236 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CYCSP99999 105 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 MAT1AQ00266 395 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 BECN1Q14457 450 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 ACKR1Q16570 336 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 LDLRAP1Q5SW96 308 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 C1orf185Q5T7R7 199 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 LCN1P1Q5VSP4 162 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 NUP210LQ5VU65 1888 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 ZNF497Q6ZNH5 498 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 LANCL3Q6ZV70 420 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 BNIPLQ7Z465 357 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CPEB2Q7Z5Q1 589 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 LUZP2Q86TE4 346 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 LRRC75A-AS1Q8N1F1 130 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 POMGNT2Q8NAT1 580 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 NPEPL1Q8NDH3 523 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 MDS2Q8NDY4 140 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 OR5M8Q8NGP6 311 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 OR5AR1Q8NGP9 310 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 OR2T11Q8NH01 316 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 OR2L2Q8NH16 312 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 BLOC1S5Q8TDH9 187 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 RMDN2Q96LZ7 410 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 URM1Q9BTM9 101 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 SNRNP25Q9BV90 132 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 CLEC7AQ9BXN2 247 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 TDRD1Q9BXT4 1180 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 WWTR1Q9GZV5 400 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 FAM96AQ9H5X1 160 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 OPA3Q9H6K4 179 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 ASB8Q9H765 288 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 PLCXD1Q9NUJ7 323 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 ETNK2Q9NVF9 386 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 B4GALT7Q9UBV7 327 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CACNG5Q9UF02 275 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CRLS1Q9UJA2 301 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 KLF13Q9Y2Y9 288 aaPredicted RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 ARID1AO14497 2285 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 TLN2Q9Y4G6 2542 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 A0A087X002 238 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 BICDL2A1A5D9 508 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 VSTM2BA6NLU5 285 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SIGLEC16A6NMB1 481 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 A8MUA0 341 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 H0YAE9 185 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 BCKDKO14874 412 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 ADAMDEC1O15204 470 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 CD5LO43866 347 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 KIAA0513O60268 411 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 NME2P1O60361 137 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 OR10H2O60403 315 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 CALB1P05937 261 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 ABCB1P08183 1280 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 PDHA2P29803 388 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 GABRA5P31644 462 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SERPINB6P35237 376 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SLC6A12P48065 614 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 AIF1P55008 147 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 ACTG1P63261 375 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 AP1B1Q10567 949 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 PTPRCAPQ14761 206 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 TOMM20Q15388 145 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 PHKG1Q16816 387 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 HSP90AA4PQ58FG1 418 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 CMPK2Q5EBM0 449 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 XKR6Q5GH73 641 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SLC35D3Q5M8T2 416 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 RNASEH2BQ5TBB1 312 aaKnown RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 PDPK2PQ6A1A2 396 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 PRMT9Q6P2P2 845 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 ARCQ7LC44 396 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 TAS2R42Q7RTR8 314 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 GLT6D1Q7Z4J2 308 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 RPS19BP1Q86WX3 136 aaKnown RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 KIRREL3Q8IZU9 778 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 LIX1Q8N485 282 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 ARIH2OSQ8N7S6 290 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 POGLUT1Q8NBL1 392 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SGMS2Q8NHU3 365 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SLC22A8Q8TCC7 542 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SKA2Q8WVK7 121 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 TAF15Q92804 592 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD8-212ENST00000557329 TMCO6Q96DC7 493 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 DHTKD1Q96HY7 919 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 JSRP1Q96MG2 331 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 SPATA13Q96N96 652 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 CYTH2Q99418 400 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 OLFM1Q99784 485 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 NKX3-1Q99801 234 aaPredicted RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 SYT11Q9BT88 431 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 RBM24Q9BX46 236 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms