RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FAM220AQ7Z4H9 259 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ENTHD1Q8IYW4 607 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 LRRC43Q8N309 656 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 TMEM252Q8N6L7 170 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 C15orf54Q8N8G6 183 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 OR13C2Q8NGS9 318 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 FAM3CQ92520 227 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 FAHD2AQ96GK7 314 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 AKR1E2Q96JD6 320 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 SRXN1Q9BYN0 137 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 MAGT1Q9H0U3 335 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ZDHHC11Q9H8X9 412 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 NANOGQ9H9S0 305 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 APMAPQ9HDC9 416 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 RNF14Q9UBS8 474 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 DCDC2Q9UHG0 476 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 PTBP2Q9UKA9 531 aaKnown RBP2.91□□□□□ -1.94
SCFD1-221ENST00000556534 SCML2Q9UQR0 700 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 OARD1Q9Y530 152 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 CDH10Q9Y6N8 788 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 KIF16BQ96L93 1317 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 PLEKHG1Q9ULL1 1385 aa2.9□□□□□ -1.94
SCFD1-221ENST00000556534 A0A1B0GWB2 263 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 METTL21EPA6NDL7 271 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 BTN3A3O00478 584 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 FCN1O00602 326 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 PRRG1O14668 218 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 ARPC3O15145 178 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 TRAF3IP2O43734 574 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 PSG2P11465 335 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 TPSB2P20231 275 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 HOXD10P28358 340 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 UGT1A5P35504 534 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 NUP107P57740 925 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 EWSR1Q01844 656 aaKnown RBP eCLIP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 RIPPLY1Q0D2K3 151 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 RAB40BQ12829 278 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 TPSAB1Q15661 275 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 SYPL1Q16563 259 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 GGTA1PQ4G0N0 100 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 ATF7IP2Q5U623 682 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 KHDRBS2Q5VWX1 349 aaKnown RBP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 WDR74Q6RFH5 385 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 UNQ9370/PRO34162Q6UXP9 181 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 CDH26Q8IXH8 852 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF683Q8IZ20 524 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 SLC38A6Q8IZM9 456 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 DCAF4L2Q8NA75 395 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 OR52I1Q8NGK6 324 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 CTNNBL1Q8WYA6 563 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 OR1E3Q8WZA6 343 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 PIGCQ92535 297 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 TUBGCP3Q96CW5 907 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 OMDQ99983 421 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 CRNKL1Q9BZJ0 848 aaKnown RBP2.9□□□□□ -1.95
SCFD1-221ENST00000556534 TM9SF3Q9HD45 589 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 MYOZ2Q9NPC6 264 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 CDC42BPBQ9Y5S2 1711 aa2.9□□□□□ -1.95
SCFD1-221ENST00000556534 NACAE9PAV3 2078 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 XKRY2A2RUG3 117 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF32P17041 273 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 PSMA2P25787 234 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 CD1BP29016 333 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 EPHX2P34913 555 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 PLA2G16P53816 162 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 BEX3Q00994 111 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 DDX39BQ13838 428 aaKnown RBP2.89□□□□□ -1.95
SCFD1-221ENST00000556534 PDK3Q15120 406 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 ZMYND11Q15326 602 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 SLC5A12Q1EHB4 618 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 C10orf120Q5SQS8 335 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 SYT10Q6XYQ8 523 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 APTXQ7Z2E3 356 aaKnown RBP2.89□□□□□ -1.95
SCFD1-221ENST00000556534 KIAA1328Q86T90 577 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 VSTM4Q8IW00 320 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 Q8N9L7 120 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 NEIL3Q8TAT5 605 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 TRMT10AQ8TBZ6 339 aaKnown RBP2.89□□□□□ -1.95
SCFD1-221ENST00000556534 NT5C3BQ969T7 300 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 AMDHD1Q96NU7 426 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 ARHGDIGQ99819 225 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 EBF4Q9BQW3 602 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 CAPS2Q9BXY5 557 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 GCOM2Q9BZD3 368 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-221ENST00000556534 SH2D2AQ9NP31 389 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 AIPL1Q9NZN9 384 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 PRG3Q9Y2Y8 225 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-221ENST00000556534 PLLPQ9Y342 182 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 FRMPD3Q5JV73 1810 aa2.89□□□□□ -1.95
SCFD1-221ENST00000556534 CCDC169A6NNP5 214 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 SULT2B1O00204 365 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 B4GALT2O60909 372 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 NPIPB7O75200 414 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 BBOX1O75936 387 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF44P15621 663 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 TBXA2RP21731 343 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 CALB2P22676 271 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms