RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLITRK3O94933 977 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 STSP08842 583 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ATP6V1B2P21281 511 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 HTR1FP30939 366 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PRKAR2BP31323 418 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 MEOX2P50222 304 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 EFNA3P52797 238 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 EFNB2P52799 333 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 DIO3P55073 304 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 NCBP1Q09161 790 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PLD1Q13393 1074 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 DDX39BQ13838 428 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 GRB7Q14451 532 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 MESDQ14696 234 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PRR4Q16378 134 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 OR2B11Q5JQS5 317 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 CCDC183Q5T5S1 534 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 BEND3Q5T5X7 828 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 GPRC6AQ5T6X5 926 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 MOB1BQ7L9L4 216 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 NLRP9Q7RTR0 991 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 APOBEC3FQ8IUX4 373 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 CCDC50Q8IVM0 306 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 SLC22A9Q8IVM8 553 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ZBED8Q8IZ13 594 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 GPD1LQ8N335 351 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 OR1L4Q8NGR5 311 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 RNF139Q8WU17 664 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 TCTEX1D2Q8WW35 142 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 C10orf35Q96D05 121 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 SERAC1Q96JX3 654 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PGLYRP4Q96LB8 373 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 MTMR9Q96QG7 549 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 NPY6RQ99463 290 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 RNF2Q99496 336 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 FMO2Q99518 471 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DL4Q99706 377 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 GAL3ST1Q99999 423 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF670Q9BS34 389 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 SLC35A5Q9BS91 424 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PAXXQ9BUH6 204 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 NMUR2Q9GZQ4 415 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PTGES2Q9H7Z7 377 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 FN3KRPQ9HA64 309 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 MCCC2Q9HCC0 563 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PLSCR3Q9NRY6 295 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 APOBEC3BQ9UH17 382 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 STAP1Q9ULZ2 295 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 PRPF19Q9UMS4 504 aaKnown RBP2.27□□□□□ -2.05
SCFD1-213ENST00000554776 IKBKGQ9Y6K9 419 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF318Q5VUA4 2279 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ATP10AO60312 1499 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 TTC21BQ7Z4L5 1316 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 IGKV1D-8A0A087WSZ0 117 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SNTNA6NMZ2 147 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 TRDCB7Z8K6 153 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 F5H6K3 240 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 MBTPS2O43462 519 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 RAMP3O60896 148 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 LYPD3O95274 346 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 AP2A1O95782 977 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 DBTP11182 482 aaKnown RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 RNH1P13489 461 aaKnown RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZBTB25P24278 435 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ANXA13P27216 316 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 CCR1P32246 355 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 RBMXP38159 391 aaKnown RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DS2P43631 304 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 QARSP47897 775 aaKnown RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SULT1E1P49888 294 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 P2RY4P51582 365 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 PKNOX1P55347 436 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 KLRC3Q07444 240 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 CCDC173Q0VFZ6 552 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 BST1Q10588 318 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 KLRB1Q12918 225 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 DPYSL2Q16555 572 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 LRRC36Q1X8D7 754 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 NSUN5P1Q3KNT7 163 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 RNF212Q495C1 297 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 UTF1Q5T230 341 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 OR2G6Q5TZ20 316 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF544Q6NX49 715 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ACOT7LQ6ZUV0 252 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF589Q86UQ0 364 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ECHDC2Q86YB7 292 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SKA3Q8IX90 412 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 C11orf53Q8IXP5 236 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 LRRC75A-AS1Q8N1F1 130 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SVOPLQ8N434 492 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ALLCQ8N6M5 410 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SDR9C7Q8NEX9 313 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 OR52H1Q8NGJ2 320 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 AKR7LQ8NHP1 331 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ST8SIA1Q92185 356 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 NEIL2Q969S2 332 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 UBE2E3Q969T4 207 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 NT5C3BQ969T7 300 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms