RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MYH6P13533 1939 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 TENM4Q6N022 2769 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 SPTA1P02549 2419 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MYH11P35749 1972 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NEMP2A6NFY4 417 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 F5H6K3 240 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMX2-CTNND1H3BSU7 103 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 HAS3O00219 553 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ADAM10O14672 748 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 OR10H2O60403 315 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 LRCH4O75427 683 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PIAS1O75925 651 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 KCNK5O95279 499 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PIGRP01833 764 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MT-ND5P03915 603 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 IL6RP08887 468 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SNHG28P0DPA3 235 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 THRBP10828 461 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 FCGR1AP12314 374 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ARSBP15848 533 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 HIST1H1BP16401 226 aaKnown RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 C4BPBP20851 252 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TGM2P21980 687 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 GLRA1P23415 457 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TNFSF4P23510 183 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NDUFS1P28331 727 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 C21orf33P30042 268 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MAS1LP35410 378 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PTGFRP43088 359 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SUOXP51687 545 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF134P52741 427 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 BCAT1P54687 386 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NAPAP54920 295 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM33P57088 247 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 RGS8P57771 180 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TLE4Q04727 773 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLC18A2Q05940 514 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 KLRC3Q07444 240 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ARHGAP1Q07960 439 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SF3A3Q12874 501 aaKnown RBP eCLIP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 OVGP1Q12889 678 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF155Q12901 538 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MTAPQ13126 283 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLC13A2Q13183 592 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NME3Q13232 169 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SEMA5AQ13591 1074 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 CCNIQ14094 377 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 GK2Q14410 553 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PSG3Q16557 428 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ASTE1Q2TB18 679 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TEX44Q53QW1 395 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 Q5PR19 223 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 DCAF10Q5QP82 559 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 LRIF1Q5T3J3 769 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ATG9BQ674R7 924 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 KDM4DQ6B0I6 523 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 RGS7BPQ6MZT1 257 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ANKRD16Q6P6B7 361 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 B3GNT9Q6UX72 402 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 C16orf89Q6UX73 402 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MFSD7Q6UXD7 560 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM108Q6UXF1 575 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF517Q6ZMY9 492 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 GCNT7Q6ZNI0 430 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLC46A3Q7Z3Q1 461 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PIWIL4Q7Z3Z4 852 aaKnown RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 FAM90A1Q86YD7 464 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 C10orf107Q8IVU9 208 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 FAM58AQ8N1B3 248 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PNLDC1Q8NA58 520 aaKnown RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 OR5M8Q8NGP6 311 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLC35G2Q8TBE7 412 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ZFP90Q8TF47 636 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 CHURC1Q8WUH1 139 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 GLMPQ8WWB7 406 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ACOT11Q8WXI4 607 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SMPDL3AQ92484 453 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TM9SF4Q92544 642 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 RAD54LQ92698 747 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SPSB4Q96A44 273 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 OTULINQ96BN8 352 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 CCDC124Q96CT7 223 aaKnown RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 Q96MT0 163 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 OR52B2Q96RD2 323 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TAAR9Q96RI9 348 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MCCC1Q96RQ3 725 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NODALQ96S42 347 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 RNF2Q99496 336 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 KLF6Q99612 283 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 IL12RB2Q99665 862 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NIPSNAP1Q9BPW8 284 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM47Q9BQJ4 181 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 EBF4Q9BQW3 602 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 THTPAQ9BU02 230 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 CCDC32Q9BV29 185 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TPPP3Q9BW30 176 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 DDA1Q9BW61 102 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms