RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DPYSL5Q9BPU6 564 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 PRDM9Q9NQV7 894 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 LANCL2Q9NS86 450 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 TRAV27A0A087WT01 109 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 ZC3H12DA2A288 527 aaKnown RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 TRAPPC13A5PLN9 417 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 OR5F1O95221 314 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 THBS1P07996 1170 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 ARRB1P49407 418 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 SMSP52788 366 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 SNRPGP62308 76 aaKnown RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 CDK5Q00535 292 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 LIPKQ5VXJ0 399 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MBOAT2Q6ZWT7 520 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 PLCZ1Q86YW0 608 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 PLXDC1Q8IUK5 500 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 OR51A7Q8NH64 312 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 LHFPL5Q8TAF8 219 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 C11orf54Q9H0W9 315 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MED20Q9H944 212 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 AUP1Q9Y679 476 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 CNTRLQ7Z7A1 2325 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MPZL2O60487 215 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MYL9P24844 172 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 DECR1Q16698 335 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 LAX1Q8IWV1 398 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 GPR135Q8IZ08 494 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 BCORP1Q8N888 145 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 OR13C2Q8NGS9 318 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 PTPMT1Q8WUK0 201 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 TM9SF2Q99805 663 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 LRRN3Q9H3W5 708 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 FGF21Q9NSA1 209 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MPDZO75970 2070 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 PCP4L1A6NKN8 68 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 H3BMH7 237 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 GDF9O60383 454 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 MRPS14O60783 128 aaKnown RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 PRAMEF2O60811 474 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 IFNGR2P38484 337 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 GXYLT1Q4G148 440 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 CD300LDQ6UXZ3 194 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 CREB3L2Q70SY1 520 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 POGLUT1Q8NBL1 392 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 TMEM239Q8WW34 195 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 POLR2J2Q9GZM3 115 aaKnown RBP10.75□□□□□ -0.69
SHMT2-212ENST00000554467 SRRQ9GZT4 340 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 Q9N2J8 555 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 CTSFQ9UBX1 484 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 EPHA6Q9UF33 1036 aa10.75□□□□□ -0.69
SHMT2-212ENST00000554467 A0A1B0GWA3 101 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 SH3D21A4FU49 640 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 SAGP10523 405 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 GSTM3P21266 225 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CCR4P51679 360 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZCCHC12Q6PEW1 402 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF574Q6ZN55 896 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF767PQ75MW2 155 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF615Q8N8J6 731 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZFP41Q8N8Y5 198 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 OR9Q1Q8NGQ5 310 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LILRB1Q8NHL6 650 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 KLHDC3Q9BQ90 382 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 NDC1Q9BTX1 674 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 DNAJB12Q9NXW2 375 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 HSPB11Q9Y547 144 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LYPD3O95274 346 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CLPSP04118 112 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 NGFRP08138 427 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZGLP1P0C6A0 271 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CFL1P23528 166 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CD79BP40259 229 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 GCGRP47871 477 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 EPHA4P54764 986 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 HSD17B7P56937 341 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ARHGAP40Q5TG30 622 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 GARNL3Q5VVW2 1013 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 RASSF6Q6ZTQ3 369 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LANCL3Q6ZV70 420 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LMF2Q9BU23 707 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ASPNQ9BXN1 380 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 POLDIP3Q9BY77 421 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 SMOC1Q9H4F8 434 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ABCB9Q9NP78 766 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 MEPEQ9NQ76 525 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 B3GNT2Q9NY97 397 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 MALT1Q9UDY8 824 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 MKL2Q9ULH7 1088 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CBLCQ9ULV8 474 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 FITM1A5D6W6 292 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 PLA2G10O15496 165 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 SIGLEC6O43699 453 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 TIAF1O95411 115 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 RPS19P39019 145 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ETV5P41161 510 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ETV1P50549 477 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms