RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PEX11BO96011 259 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 EPOP01588 193 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 FTH1P02794 183 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RAB40ALP0C0E4 278 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZSCAN5DPP0CG00 497 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GLB1P16278 677 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF28P17035 718 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ME2P23368 584 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SSTR2P30874 369 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 AQP2P41181 271 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RBM34P42696 430 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SLC6A9P48067 706 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MRPL19P49406 292 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HOXA1P49639 335 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DYNLT1P63172 113 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SPOCK1Q08629 439 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 BNIP2Q12982 314 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TMED2Q15363 201 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ELOCQ15369 112 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 C18orf21Q32NC0 220 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SLC25A52Q3SY17 297 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SLC25A53Q5H9E4 307 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CATSPEREQ5SY80 951 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 LGSNQ5TDP6 509 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HIST2H2BCQ6DN03 193 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HIST2H2BDQ6DRA6 164 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ASPHD2Q6ICH7 369 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GUSBP11Q6P575 273 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 LIPIQ6XZB0 460 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CERS6Q6ZMG9 384 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SH2D5Q6ZV89 423 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CYS1Q717R9 158 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PARS2Q7L3T8 475 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PARP8Q8N3A8 854 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 METTL4Q8N3J2 472 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MMGT1Q8N4V1 131 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 FITM2Q8N6M3 262 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MCUQ8NE86 351 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 OR10A7Q8NGE5 316 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DYNC2LI1Q8TCX1 351 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 FAM222BQ8WU58 562 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF480Q8WV37 535 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 NUDT8Q8WV74 236 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ST8SIA1Q92185 356 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SLC38A4Q969I6 547 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 FUBP1Q96AE4 644 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ECHDC3Q96DC8 303 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 C16orf92Q96LL3 132 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF641Q96N77 438 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RILPQ96NA2 401 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF385AQ96PM9 386 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 OR5B2Q96R09 309 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PFDN5Q99471 154 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC3Q9BQI4 270 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MCRIP2Q9BUT9 160 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ABHD6Q9BV23 337 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ADI1Q9BV57 179 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM109Q9BVC6 243 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 NMUR2Q9GZQ4 415 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SRRQ9GZT4 340 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 IL22Q9GZX6 179 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 C1orf198Q9H425 327 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ELOVL6Q9H5J4 265 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF430Q9H8G1 570 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TMBIM4Q9HC24 238 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HHATLQ9HCP6 504 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 APMAPQ9HDC9 416 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ADAP2Q9NPF8 381 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PRDM7Q9NQW5 492 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GIN1Q9NXP7 522 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ARMCX1Q9P291 453 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PRSS50Q9UI38 385 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 NDUFAF1Q9Y375 327 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 UTP11Q9Y3A2 253 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HEMK1Q9Y5R4 338 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 NPTNQ9Y639 398 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SDK2Q58EX2 2172 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DMXL2Q8TDJ6 3036 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TDRD6O60522 2096 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 A0A0G2JND7 137 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 A0A1W2PQ72 361 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CCT8L1PA6NM43 557 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 EFCAB7A8K855 629 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 KPNA3O00505 521 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CFLARO15519 480 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HS6ST1O60243 411 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TNFSF15O95150 251 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 H6PDO95479 791 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 AP2A1O95782 977 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CYB5R3P00387 301 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HEXAP06865 529 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CD3EP07766 207 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ANKRD34CP0C6C1 535 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 UCHL3P15374 230 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GM2AP17900 193 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ATP6V1B2P21281 511 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DRD4P21917 467 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 LAP3P28838 519 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PRDX2P32119 198 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms