RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 OR6K3Q8NGY3 331 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 QRSL1Q9H0R6 528 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 RAD21L1Q9H4I0 556 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 COQ10BQ9H8M1 238 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 HRNRQ86YZ3 2850 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 TMEM247A6NEH6 219 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 NR5A2O00482 541 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 EFNA2O43921 213 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 CTAG2O75638 210 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 GOSR1O95249 250 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ETFAP13804 333 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 NID1P14543 1247 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 HOXB9P17482 250 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SHC1P29353 583 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 CTBP2P56545 445 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 CARD18P57730 90 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SESN3P58005 492 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 KCNJ10P78508 379 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 PLAURQ03405 335 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 FADDQ13158 208 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 LRIF1Q5T3J3 769 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 GRINAQ7Z429 371 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 BTLAQ7Z6A9 289 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF563Q8TA94 476 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 OSTF1Q92882 214 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ZG16BQ96DA0 208 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SPDL1Q96EA4 605 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 AURKBQ96GD4 344 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 REXO5Q96IC2 774 aaKnown RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 HOPXQ9BPY8 73 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 PAIP1Q9H074 479 aaKnown RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 MTHFD2LQ9H903 347 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SPAG4Q9NPE6 437 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SERINC1Q9NRX5 453 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ACER3Q9NUN7 267 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 DNAJB12Q9NXW2 375 aaKnown RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 ELOVL5Q9NYP7 299 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 PROCRQ9UNN8 238 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 PCDHB14Q9Y5E9 798 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 SPIN1Q9Y657 262 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-211ENST00000554310 MPDZO75970 2070 aa11.69□□□□□ -0.54
SHMT2-211ENST00000554310 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 A6NNC1 897 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 ANGPT2O15123 496 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 BCAS1O75363 584 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 CGAP01215 116 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 BCHEP06276 602 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 TFPTP0C1Z6 253 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 EPXP11678 715 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 BMP2P12643 396 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 UQCRBP14927 111 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 IL7RP16871 459 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 PPIBP23284 216 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 CD79BP40259 229 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 HTR3AP46098 478 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 MERTKQ12866 999 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 TRAP1Q12931 704 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 FLOT2Q14254 428 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 DAZAP2Q15038 168 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 RNPS1Q15287 305 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 MAPK11Q15759 364 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 TMEM176BQ3YBM2 270 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 SAMD4BQ5PRF9 694 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 PRAMEF8Q5VWM4 474 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 PRAMEF7Q5VXH5 474 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 PLEKHM3Q6ZWE6 761 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 SLC38A5Q8WUX1 472 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF524Q96C55 264 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 ASB9Q96DX5 294 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 TMEM19Q96HH6 336 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 DACH2Q96NX9 599 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 SLC39A3Q9BRY0 314 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 SRXN1Q9BYN0 137 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 CACYBPQ9HB71 228 aaKnown RBP11.68□□□□□ -0.54
SHMT2-211ENST00000554310 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 GID8Q9NWU2 228 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
SHMT2-211ENST00000554310 A0A1W2PP18 115 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 FAM221AA4D161 298 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 SH3D21A4FU49 640 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms