RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SPG11Q96JI7 2443 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 A0A1W2PS29 197 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 PINLYPA6NC86 204 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 NPIPA2E9PIF3 369 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 NPIPA3F8WFD2 350 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 J3KTA2 159 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 ACOT7O00154 380 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 NOL3O60936 208 aaKnown RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 STX11O75558 287 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 DBIP07108 87 aaKnown RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 CDC42P60953 191 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 PLGLB1Q02325 96 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 MVKQ03426 396 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 CHRNEQ04844 493 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 STX4Q12846 297 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 DUSP8Q13202 625 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 GANABQ14697 944 aaKnown RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 KRTAP21-3Q3LHN1 58 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 FGD3Q5JSP0 725 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 AP1ARQ63HQ0 302 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 IL20RBQ6UXL0 311 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 B3GNT6Q6ZMB0 384 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 C16orf47Q6ZP98 133 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 KCTD8Q6ZWB6 473 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 P3H2Q8IVL5 708 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 OR4N5Q8IXE1 308 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 VWA5B2Q8N398 1253 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 SVOPQ8N4V2 548 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 AQP11Q8NBQ7 271 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 TMEM52Q8NDY8 209 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 OR5M3Q8NGP4 307 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 OR52P1PQ8NH57 321 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 VANGL1Q8TAA9 524 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 SLC9A6Q92581 669 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 HOXB13Q92826 284 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 ANKRD9Q96BM1 317 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 ZNF350Q9GZX5 532 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 SAP130Q9H0E3 1048 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 LIN28AQ9H9Z2 209 aaKnown RBP14.57□□□□□ -0.08
ACTN1-209ENST00000553659 SLC24A3Q9HC58 644 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 PCDHGB1Q9Y5G3 927 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 CEPT1Q9Y6K0 416 aa14.57□□□□□ -0.08
ACTN1-209ENST00000553659 SETD2Q9BYW2 2564 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 OR14I1A6ND48 311 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 FAM166BA8MTA8 275 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 AP3D1O14617 1153 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 LDB3O75112 727 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 OR6B1O95007 311 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CYP4B1P13584 511 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 OSMP13725 252 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 IL7RP16871 459 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 GSTM3P21266 225 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CNR1P21554 472 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 GSTT1P30711 240 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 POLR2IP36954 125 aaKnown RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 ART1P52961 327 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 ST3GAL3Q11203 375 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CTU2Q2VPK5 515 aaKnown RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CYP27C1Q4G0S4 372 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 ZNF770Q6IQ21 691 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CD300LDQ6UXZ3 194 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 FRRS1Q6ZNA5 592 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 SLC22A16Q86VW1 577 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 ZNF619Q8N2I2 560 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 COX18Q8N8Q8 333 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 SLC16A11Q8NCK7 471 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 OIT3Q8WWZ8 545 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CDS1Q92903 461 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 SLC38A4Q969I6 547 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 RBM18Q96H35 190 aaKnown RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 NODALQ96S42 347 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 RASL10BQ96S79 203 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 LMF2Q9BU23 707 aaKnown RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 TTTY12Q9BZ98 90 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 KRCC1Q9NPI7 259 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-209ENST00000553659 PLCXD1Q9NUJ7 323 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 A4GNTQ9UNA3 340 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 CLCA3PQ9Y6N3 262 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 FREM3P0C091 2139 aa14.56□□□□□ -0.08
ACTN1-209ENST00000553659 VGLL3A8MV65 326 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 WWP2O00308 870 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 FFAR1O14842 300 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 AHCYL1O43865 530 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 OR10H3O60404 316 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 GLSO94925 669 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-209ENST00000553659 NKX2-2O95096 273 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 OR5F1O95221 314 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 IGHG3P01860 377 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 IFNA16P05015 189 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 ACP2P11117 423 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 ACVR2AP27037 513 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 SOX3P41225 446 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 MAP3K8P41279 467 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 STT3AP46977 705 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 POU6F2P78424 691 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-209ENST00000553659 MGAT2Q10469 447 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 TRAM2Q15035 370 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 DUSP5Q16690 384 aa14.55□□□□□ -0.08
ACTN1-209ENST00000553659 TRMT12Q53H54 448 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms