RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 A0A0X1KG70 313 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 HMX2A2RU54 273 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ESPNB1AK53 854 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 EIF3HO15372 352 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF39-204ENST00000553605 PRSS23O95084 383 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 CECR9P0C854 216 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 TFPIP10646 304 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ATP6V1C1P21283 382 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 PAX7P23759 505 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 CALCRP30988 508 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 HSD17B3P37058 310 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 MAGEA8P43361 318 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 CCR4P51679 360 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 HGFACQ04756 655 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 SLC9B1Q4ZJI4 515 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF311Q5JNZ3 666 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ACSM5Q6NUN0 579 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ZCCHC12Q6PEW1 402 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 CDK20Q8IZL9 346 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 TMCO5AQ8N6Q1 288 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 OR4M2Q8NGB6 313 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 METTL6Q8TCB7 284 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 BOD1Q96IK1 185 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 MS4A4EQ96PG1 132 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
PRPF39-204ENST00000553605 ACSS1Q9NUB1 689 aaPredicted RBP11.91□□□□□ -0.5
PRPF39-204ENST00000553605 CORINQ9Y5Q5 1042 aa11.91□□□□□ -0.5
PRPF39-204ENST00000553605 J3QLI3 93 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF264O43296 627 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
PRPF39-204ENST00000553605 MPZL1O95297 269 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 ACHEP22303 614 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 HMOX2P30519 316 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 GCH1P30793 250 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 HTR6P50406 440 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 TMEM33P57088 247 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 SESN3P58005 492 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 CLCQ05315 142 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 NAB1Q13506 487 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 RASA2Q15283 850 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 SIGLECL1Q8N7X8 197 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.5
PRPF39-204ENST00000553605 JADE3Q92613 823 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 RDH5Q92781 318 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 LRRC58Q96CX6 371 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 DNAJA3Q96EY1 480 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 THUMPD3Q9BV44 507 aaKnown RBP11.9□□□□□ -0.5
PRPF39-204ENST00000553605 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
PRPF39-204ENST00000553605 CRNNQ9UBG3 495 aaPredicted RBP11.9□□□□□ -0.5
PRPF39-204ENST00000553605 SLC9A8Q9Y2E8 581 aa11.9□□□□□ -0.5
PRPF39-204ENST00000553605 PPIHO43447 177 aaKnown RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 DNPH1O43598 174 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 PLPP2O43688 288 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 PMS2P2O95744 297 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 CDC25BP30305 580 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 STX2P32856 288 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 ATP12AP54707 1039 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 POU3F1Q03052 451 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 ZP4Q12836 540 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 MERTKQ12866 999 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 TBRG1Q3YBR2 411 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 CDC73Q6P1J9 531 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 GAS2L3Q86XJ1 694 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 ST8SIA1Q92185 356 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 CDS1Q92903 461 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 DVL3Q92997 716 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 CIDECQ96AQ7 238 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 MRRFQ96E11 262 aaKnown RBP11.89□□□□□ -0.51
PRPF39-204ENST00000553605 CHMP6Q96FZ7 201 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 C1QTNF3Q9BXJ4 246 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 SEC61A2Q9H9S3 476 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 SNX12Q9UMY4 172 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 DTNAQ9Y4J8 743 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 FLVCR1Q9Y5Y0 555 aa11.89□□□□□ -0.51
PRPF39-204ENST00000553605 RYR3Q15413 4870 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 PDPK1O15530 556 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 HPXP02790 462 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 UBL4AP11441 157 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 SERPINB8P50452 374 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 OR2B6P58173 313 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 H3F3AP84243 136 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 GPRIN3Q6ZVF9 776 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 TMEM234Q8WY98 164 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 ARL5BQ96KC2 179 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 STACQ99469 402 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 MMP27Q9H306 513 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms