RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ANKRD27Q96NW4 1050 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 DUX5Q96PT3 197 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PRPF18Q99633 342 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NAPGQ99747 312 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CENPOQ9BU64 300 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 FRMD8P1Q9BZ68 369 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 GOLPH3Q9H4A6 298 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PRDM13Q9H4Q3 707 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CNOT10Q9H9A5 744 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ZBTB26Q9HCK0 441 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 HEYLQ9NQ87 328 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 G6PC2Q9NQR9 355 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 FBXO6Q9NRD1 293 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NECAP2Q9NVZ3 263 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PAK5Q9P286 719 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NUP50Q9UKX7 468 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ABCG2Q9UNQ0 655 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 VWA7Q9Y334 891 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NOTCH3Q9UM47 2321 aa4.46□□□□□ -1.69
CKAP4-203ENST00000553039 A0A0J9YW62 118 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SDR42E2A6NKP2 422 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF724A8MTY0 619 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 G3V4G9 280 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RGS14O43566 566 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PLPP2O43688 288 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 TSPAN2O60636 221 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ERLIN1O75477 346 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RAD51DO75771 328 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 URI1O94763 535 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 NGFP01138 241 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CRYAAP02489 173 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PRB2P02812 416 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 OPN1LWP04000 364 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CSF1P09603 554 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CT62P0C5K7 136 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 FAM58BPP0C7Q3 252 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CPMP14384 443 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SELEP16581 610 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CSNK2A2P19784 350 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ACHEP22303 614 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 OMGP23515 440 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 EVI2BP34910 448 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 EIF1P41567 113 aaKnown RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PSMD4P55036 377 aaKnown RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 LMO4P61968 165 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 MXRA7P84157 204 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PRR5P85299 388 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 IL1RL1Q01638 556 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 IRF8Q02556 426 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SPOCK1Q08629 439 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SLC9A3R2Q15599 337 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 TBCCQ15814 346 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 NNATQ16517 81 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 TMEM44Q2T9K0 475 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 DEFB121Q5J5C9 76 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 OR52E8Q6IFG1 317 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 MED27Q6P2C8 311 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 IKBIPQ70UQ0 350 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF572Q7Z3I7 529 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 TRABD2AQ86V40 505 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 DENND6AQ8IWF6 608 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SLC35F6Q8N357 371 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 TCAIMQ8N3R3 496 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 GTPBP8Q8N3Z3 284 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SLC35B2Q8TB61 432 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RNF128Q8TEB7 428 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ABHD3Q8WU67 409 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ST8SIA4Q92187 359 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RDH5Q92781 318 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SPSB4Q96A44 273 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RAB39BQ96DA2 213 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ADGRG7Q96K78 797 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 BBS4Q96RK4 519 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 DOK1Q99704 481 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 C1QTNF5Q9BXJ0 243 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 MS4A8Q9BY19 250 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF717Q9BY31 904 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ITPAQ9BY32 194 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 MS4A7Q9GZW8 240 aaPredicted RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PAIP1Q9H074 479 aaKnown RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 RACGAP1Q9H0H5 632 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 GPR35Q9HC97 309 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
CKAP4-203ENST00000553039 DYNLRB1Q9NP97 96 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 CA10Q9NS85 328 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ASB6Q9NWX5 421 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 PLEK2Q9NYT0 353 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 AMDHD2Q9Y303 409 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 JRKLQ9Y4A0 524 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 OR10H1Q9Y4A9 318 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 ASB4Q9Y574 426 aa4.46□□□□□ -1.7
CKAP4-203ENST00000553039 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ATP6V1G2-DDX39BF2Z307 99 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 PGRMC2O15173 223 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 PPIHO43447 177 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 SCO2O43819 266 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 FADS1O60427 444 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms