RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NBPF19A0A087WUL8 3843 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TMED7-TICAM2A0A0A6YYA0 188 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 NME4O00746 187 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF208O43345 1280 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CXCL13O43927 109 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 GCM2O75603 506 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SYNGR4O95473 234 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 OPN1LWP04000 364 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 C8BP07358 591 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 PRG2P13727 222 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 BMP5P22003 454 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TACR3P29371 465 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 OPRM1P35372 400 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CLK1P49759 484 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 ASCL1P50553 236 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC7A2P52569 658 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CRYBA2P53672 197 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CARD18P57730 90 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 RGS8P57771 180 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 NCALDP61601 193 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TFF3Q07654 80 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 GUSBP1Q15486 140 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TMEM176BQ3YBM2 270 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 GLIPR1L2Q4G1C9 344 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 EEF1A1P5Q5VTE0 462 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 POMZP3Q6PJE2 187 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 PLXDC2Q6UX71 529 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC15A3Q8IY34 581 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 MICU2Q8IYU8 434 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 GCNT2Q8N0V5 402 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CADM2Q8N3J6 435 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 ATP6V1C2Q8NEY4 427 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 RNF128Q8TEB7 428 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TAMM41Q96BW9 452 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 OR5B2Q96R09 309 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SRXN1Q9BYN0 137 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 ADAM19Q9H013 955 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 PIF1Q9H611 641 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SPAG4Q9NPE6 437 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 KCNJ16Q9NPI9 418 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 CMTM6Q9NX76 183 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TAGLN3Q9UI15 199 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 OSGIN1Q9UJX0 560 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC13A4Q9UKG4 626 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 TMED7Q9Y3B3 224 aa10.5□□□□□ -0.73
TRAFD1-209ENST00000552896 A0A1W2PNV4 684 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ELOVL7A1L3X0 281 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 NKX2-6A6NCS4 301 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 CCT8L1PA6NM43 557 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 TMEM229AB2RXF0 380 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 FRS3O43559 492 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 DNPH1O43598 174 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 TPST1O60507 370 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 FMO6PO60774 539 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 TNFSF13O75888 250 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 AQP8O94778 261 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 PMS2P2O95744 297 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 OPN1SWP03999 348 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 CD247P20963 164 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 KCNJ5P48544 419 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 RAC3P60763 192 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 CSNK2A1P68400 391 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 NRF1Q16656 503 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 FBXL19-AS1Q494R0 122 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 C6orf89Q6UWU4 347 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ATG4DQ86TL0 474 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 RANBP3LQ86VV4 465 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ADGRG3Q86Y34 549 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 LIX1LQ8IVB5 337 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 LSMEM1Q8N8F7 131 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 SMYD1Q8NB12 490 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ACBD4Q8NC06 268 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 GPR32P1Q8NGA4 272 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 OSTF1Q92882 214 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 INTS12Q96CB8 462 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 DDIT4LQ96D03 193 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 GMPPAQ96IJ6 420 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ARHGDIGQ99819 225 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 PIGMQ9H3S5 423 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ALG2Q9H553 416 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 C12orf10Q9HB07 376 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 GLRX2Q9NS18 164 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 ARL8BQ9NVJ2 186 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 USP22Q9UPT9 525 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 HDGFL3Q9Y3E1 203 aa10.49□□□□□ -0.73
TRAFD1-209ENST00000552896 A0A1W2PNR3 127 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 TMEM72A0PK05 275 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 EEF1E1-BLOC1S5C9J1V9 151 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 M0QX08 132 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 EEF1E1O43324 174 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 SS18L1O75177 396 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 LGI1O95970 557 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 IFNA14P01570 189 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 CXCR1P25024 350 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 HTR2AP28223 471 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 GRNP28799 593 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 CPA2P48052 419 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 DIO1P49895 249 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 PSME3P61289 254 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms